Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi367g00017 ATGGACATGGAAATAGACATGGATGCTATCCACCACCTCGACTTCTCCGGAAACAGCAGCACCCTCACCAACACCCCTTCTTCTGACGATGGTTACGGTTGCAACTGGAACCACTGGTCCCCGATAGTCAACTGGGACACCTTCACAGGTGCCCCAGATGACTTTCACCACCTCATGGACACCATCATCGAGGACAGAACCACTATCCTCGACCAGTTCAGCCCAACTACCACCACCACGACCACAACCACCGAGGAGGAAGAAGAAGCCGAAACAACCACAACCACTACCACCAACACAACAACAACATCAACAACGGAAACAACACAAACAGTTGGCGATGGAAATGATTTAAAGGGGCTAAAACTAGTGCACCTATTGATGGCTGGCGCAGAAGCCTTAACCGGCTCCACCAAGAGCCGCGACTTAGCCCGAGTGATATTGGTTCGGCTCAAGGAAATGGTTTCACAACACGCCAACGGCTCCAACATGGAAAGACTCGCCGCTTATTTCACCGAAGCTCTTCACGGCCTACTAGAAGGCGCCGGGGGTGCGCACAACAACCACAACAACAAACATTACCTCACCACCAGCGGACCCCACGACAACCAAAACGACACACTCGCTGCTTTCCAACTACTCCAAGACATGTCTCCTTACGTCAAGTTCGGCCACTTCACGGCCAATCAAGCCATACTCGAGTCCGTGGCCCACGAACGCCGCGTCCATGTCGTCGACTACGACATTATGGAAGGGGTCCAATGGGCTTCACTAATCCAAGCCCTAGCTTCCAACAACAACAGCCCGCATCTCCGGATCACCGCATTATCACGAACCGGAACAGGAAGGAGGTCAATCGCCACCGTACAAGAAACCGGACGCCGTTTAACCTCCTTCGCCGCTTCCCTCGGTCAGCCGTTTTCTTTTCATCACTGCAGGTTAGACTCCGACGAAACCTTCCGTCCATCTTCCTTGAAGCTTGTTCGAGGAGAGGCTTTGGTTTTCAACTGCATGCTGAATCTTCCTCATCTTAGTTATCGTGCACCCGACTCGGTTGCTTCGTTTTTAAACGGAGCAAAATCTTTAAGCCCGAAGCTTGTGACATTGGTGGAGGAGGAAAATGGATCTGTCATCGGTGGATTTGTGGAGCGGTTCATGGACTCGCTTCATCATTACTCAGCGGTGTTTGATTCATTAGAGGCTGGTTTTCCGATGCAGAACCGGGCCAGGGCTTTGGTGGAGCGAGTGTTTTTCGGCCCACGAATCGCGGGCTCATTGGGCCGGATATATAGAACAGGCGGAGACGGAGAGGAGGAGAGAAGGTCGTGGGGGGAGTGGTTAGCTGCGGCGGGGTTTAGAGGAGTTCCGGTGAGCTTTGCGAATCATTGTCAAGCGAAGCTGTTGTTGGGTCTTTTCAATGATGGGTATAAGGTGGAAGAGGTGGGTGTGGGCAGTAATAAGTTGGTGTTAGATTGGAAATCACGGCGTTTGCTTTCTGCATCGGTTTGGAGTTTTTCTTCAGATTCTGATTTATAG 1536 0.5176 MDMEIDMDAIHHLDFSGNSSTLTNTPSSDDGYGCNWNHWSPIVNWDTFTGAPDDFHHLMDTIIEDRTTILDQFSPTTTTTTTTTEEEEEAETTTTTTTNTTTTSTTETTQTVGDGNDLKGLKLVHLLMAGAEALTGSTKSRDLARVILVRLKEMVSQHANGSNMERLAAYFTEALHGLLEGAGGAHNNHNNKHYLTTSGPHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAILESVAHERRVHVVDYDIMEGVQWASLIQALASNNNSPHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSSLKLVRGEALVFNCMLNLPHLSYRAPDSVASFLNGAKSLSPKLVTLVEEENGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLGRIYRTGGDGEEERRSWGEWLAAAGFRGVPVSFANHCQAKLLLGLFNDGYKVEEVGVGSNKLVLDWKSRRLLSASVWSFSSDSDL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi367g00017 511 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 499 IPR005202 -
Vivi367g00017 511 MobiDBLite consensus disorder prediction 74 115 - -
Vivi367g00017 511 Pfam GRAS domain family 123 503 IPR005202 -
Vivi367g00017 511 MobiDBLite consensus disorder prediction 93 115 - -
Vivi367g00017 511 ProSiteProfiles GRAS family profile. 114 504 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi367g00017 82 504 GRAS Transcription Factor Family AT3G54220 34.332 9.58e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi367g00017 GRAS 9.6e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi367g00017 - - tpra:123896871 825.083