Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00031 ATGGAGTGTCACAGAAGCGACAGACAAGTGGTTGTGCCAGTGTTCTACCATTTAGATCCCTCTGAAGTGCGTAATCAGAGAGGCGAGTTTGGAGAAGCTTTTCAACGTCTTTTGAACAAAATGAAAAAGGATGTAAATTTCGATTTACTGTGTGAAAGGGAATTGGGGTGGAGAGCGACGCTTCATCTGGCGGCTAACATTGCAGGGTTCGTAATACTAAACTCCAGGAATGAAAGTGAGGATATCAAAACTATTGTCGACAAAATTTCATATTTGTTGGACAAGACAGATTTGTTTATTACGCATAATCCCGTGGGAATTGAATCTCGAGTGCAAGATGTGATTCAACTTCTACCCATCCAATCAAATGATGTTCTACTACTAGGGATGTGGGGCATGGGGGGAATTGGAAAAACAACCATTGCAAAAGCCGTTTACAATAAGATTGGCCGCAATTTTAAAGGTAGGAGCTTCCTTGCTAATATTAGGCAAAATGGGAGGAAAATTGATGGACTAGTGGGTTTACAAAAGCAACTTCTATTTGATATCTACAAAGAATCGCCAATCAAGACACAATACATTCAGTCGGGAATAGCCATATTACAAAATAAACCCAATAAAAAGAAAGTACTTATTGTACTTGATGATGTGAGTACGTTAGAGGAAATGAATACTTTTTGTGGAAGTCGTAAATGGTTTGGTCAAGGGAGTATAATAATCATCACAACCAGAGATATGCATTTACTTAATGGGAGAGTTGACCAAATATACAACATGACAATAATGAATGAAAGTGAATCAATTGAGCTTTTTAGTTGGAATGCGTTTAAGAAAGCGAGTCCTACAGATGATTTTAATAGAATTTCCAGAAATGTAGTTGAATATTGCGAGGGATTGCCGCTAGCTCTTGAAGTTCTTGGGTCTTTTTTGTATCATAAGACGGAATCTGAGTGGGAACTTGTATTGGAGAAACTCAAAAGAATTCCTAATAACCAAGTACAGAAGAAGTTAAGAATAAGTTATGATGGTTTAAATGATGACGATGAGCAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGATCAAAACGATGTTATACTTGTATTGAAAGACTGTGGACTTTCTGCTGAAATTGGAATAAGTGTCCTTGTTGAGCGAAGCCTTGTGATTGTTGATGATAAGAACATTCTTGGAATGCATGGTTTGGTGCGAGATATGGGAAGAGAAATTGTTCGTGAGGAATCACCAAAGAGGCCCGAGGAACGTAGCAGGTTGTGGTTTCCTAAGGATGTGATTGATGTACTATCCAGAGAAAATGGAAAATATGGTGTTTTGGGACTGGCTTTGAAGCTTCCTAGAGCTAGAGGAAGATGTTTTAGCACTACAGCTTTTGAGAAGATGGAGAGACTCAGATTCCTTCAACTTGATGAGGTAACACTTATTGGAGATTTTGAATATGTTTCTAAAGATCTTAGATGGCTGTCATGGAATGGATTAAGTCAAATACCTTCAAACTTCCATAAAGAAAATTTAGTTTCCATCGAACTTGAGAACAACAAAGTCAAACTTCTATGGAAGAAGACCCTGAGGATGGAGAAGCTAAAAATTCTCAACCTTAGTCATTCTCACTTTCTCACACGAAGCCCTGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCATTGTTGTCTGAGATTTCTCCTAGCGTTGGACATCTCAATAAAATTCTTCTGATAAATTTGGAAGACTGTGTTAGCCTACGTAGCCTCCCAAAAAGCATCTACAAGTCGAAATCTCTGAAAACTCTCCTTCTTTCGGGTTGTTTAAAGATTGACAAGTTGGAAGAAGATAAAATAGAATTTTCAACCACTCTCCTTACATATTACACTGCAATAAAAAGAGTACTCTTTTCAGTAGTAAGTTCAAAAAGCATTGGATATATTTCTAGGTGTTGCTATGAGGGATTTTCACTTGATGCGTTTCCATCTATCATTTGGCCTTGGATGTTGAGATATGCACTGATTTGTATATAA 2058 0.3741 MECHRSDRQVVVPVFYHLDPSEVRNQRGEFGEAFQRLLNKMKKDVNFDLLCERELGWRATLHLAANIAGFVILNSRNESEDIKTIVDKISYLLDKTDLFITHNPVGIESRVQDVIQLLPIQSNDVLLLGMWGMGGIGKTTIAKAVYNKIGRNFKGRSFLANIRQNGRKIDGLVGLQKQLLFDIYKESPIKTQYIQSGIAILQNKPNKKKVLIVLDDVSTLEEMNTFCGSRKWFGQGSIIIITTRDMHLLNGRVDQIYNMTIMNESESIELFSWNAFKKASPTDDFNRISRNVVEYCEGLPLALEVLGSFLYHKTESEWELVLEKLKRIPNNQVQKKLRISYDGLNDDDEQEIFLDIACFFIGMDQNDVILVLKDCGLSAEIGISVLVERSLVIVDDKNILGMHGLVRDMGREIVREESPKRPEERSRLWFPKDVIDVLSRENGKYGVLGLALKLPRARGRCFSTTAFEKMERLRFLQLDEVTLIGDFEYVSKDLRWLSWNGLSQIPSNFHKENLVSIELENNKVKLLWKKTLRMEKLKILNLSHSHFLTRSPDFSNMPNLEKLVLKDCPLLSEISPSVGHLNKILLINLEDCVSLRSLPKSIYKSKSLKTLLLSGCLKIDKLEEDKIEFSTTLLTYYTAIKRVLFSVVSSKSIGYISRCCYEGFSLDAFPSIIWPWMLRYALICI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00031 685 Gene3D - 98 256 IPR027417 -
Vivi364g00031 685 ProSiteProfiles TIR domain profile. 1 93 IPR000157 GO:0007165
Vivi364g00031 685 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 625 IPR044974 GO:0006952
Vivi364g00031 685 Gene3D - 1 97 IPR035897 -
Vivi364g00031 685 PRINTS Disease resistance protein signature 204 218 - -
Vivi364g00031 685 PRINTS Disease resistance protein signature 127 142 - -
Vivi364g00031 685 PRINTS Disease resistance protein signature 532 548 - -
Vivi364g00031 685 PRINTS Disease resistance protein signature 296 310 - -
Vivi364g00031 685 Pfam TIR domain 1 90 IPR000157 GO:0007165
Vivi364g00031 685 Gene3D - 261 345 IPR042197 -
Vivi364g00031 685 Pfam NB-ARC domain 108 340 IPR002182 GO:0043531
Vivi364g00031 685 Gene3D Ribonuclease Inhibitor 453 634 IPR032675 -
Vivi364g00031 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 356 IPR027417 -
Vivi364g00031 685 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 69 IPR035897 -
Vivi364g00031 685 SUPERFAMILY "Winged helix" DNA-binding domain 332 438 IPR036390 -
Vivi364g00031 685 SUPERFAMILY L domain-like 452 630 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00031 4 624 WRKY Transcription Factor Family AT4G12020 30.938 3.84e-75 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00031 - - psat:127121188 1084.32