Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00029 ATGGTATCAAGAGCCTCGTTTAAGATCCGGTGGGCCACCTTCTATGGTTTCCGCTATCGGGCCACCCGCCATTTATTTCCACGCTCCAGTTGTCTAGTCCTGGGCGTGAGGGGGTGTGTTAAGAGTCCCACATTGGACAATATATGGCCTGGACATGTCCTTATAAGTGGGGGCAATCCTCACCCTATAAGCCGGTTTTGTAGGGATGAGTTAGGCCCAACCACACTTCTTAACACTCGTGCTTCCTTCACTTCACATCTCTATGCTTCGCTTCAAAACGAGGGAATTCGCGTTTATATAGATGGTTGTTCACTTCCAAGGGGAGACCATATCTCAACTTCGCTACGCCAAGCAATCGAAGTCGAACAGTCTCAGATTTCTGTTATTGTTTTCTCAGCAAACTACGCCCAATCGTGTTGGTGCGTCGAAGAATTGCTGCTAATTATGCAGTGTCATAGAAACATTGGGCAAATTGTTCTGCCAGTGTTTTATGATGTAGATCCATCTGAAGTACGTCACCAAACTGGTGAGTTCGGAAAGGGATTTCAAAAACTTTTGGAAAAGTTTTGTAACGAGGGGTTGGGCGATCACCCTCCAGGTTTGGTGTGGTGGTTAGATGGTTGTGTCTCCCGTGATAATTGGAAAAGTTTTGTAACGAGGGGTTGTCCCAAGAGAAGCTGGAGAACAGAGATTTGTGAAGCTGCTTCGCTTGCTGGATTTGTAATCCCAAATTCCAGGAATGAAAGTGAGGCTATCAAAAGTATTGTTGAAAATGTTACACATTTTCTAGATAAGACACACTTGTTTATTGCTAATAATCCAGTGGGAGTTGAAACTCGAGTGAAAGAAATGATTCAAATGATAGGTCGAGACCAGGATATCCAACAATCAGATGATATTCTCCTACTAGGGATGTGGGGTATGGGAGGAGTTGGTAAAACAACCATTGCAAAAGCCATTTACAATGAAATTAGTCGCAATTTTGAAGGTAGAAGTTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAAATGTTGGACAAGTGGGTTTACAAGAACAACTTCTTTTTGATATTTGCAAAACTAAGACTTCCAAAATACAAAGCACTGAATATGGAAAAATCATTTTAAAGGAAAGACTCTGCCATAAAAGAGTATTGATTGTACTTGATGATGTGAATACATTGGACCAACTGAATGCTTTATGTGGAAATCGTAATTGGTTTGGCCCGGGTAGTAGAATAATCATCACAACAAGGGATAGACATATACTTCGAGGAAATAGGGTTAACCAAGTATACAAAATGAAGCACATGGATGAAAGTGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTACAAATGATTTTGTTGAAATTTCTAGAAATGTAGTCGAGTATTCTGGGGGATTGCCGCTGGCTTTGGAAGTCCTTGGGTCATATTTGTTTGACAGGGAAGTAAGAGAGTGGCTTTGTGTGTTGGAGAAACTCAAAAGAATTCCTAATGACCAAGTACAAAAAAAGCTAAAAATAAGCTATGACGGTTTAAATGATAACACCGAGAAAGAAACATTCCTTGACATAGCTTGTTTCTTTATTGGAATGGACCGAAATGATGTTACTCTTATATTAAATGGCTGTGGACTTTTTTCTGATATTGGAATAAGTATCTTGGTGGGACGAAGCCTTGTAACTATTGATCATCAGAATAGACTTAGAATGCATGATTTGGTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCTGAGGAGCCTGAGGTGCGTTGCAGGTTGTGGTTTGAAGAGGATGTGATTGATATACTATCTGATCAATCTGTAAGAATTTCATATACTTCATCTATTAAAGGGTTGGCTTTGAAGTTACCCAAAGCTAAGGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGACGAAACTAAGATTACTTCAACTTGCTGGAGTTAAACTTGATGGAGATTTTGAATATCTTTCAAAAAATCTGAGATGGCTGTCTTGGAATGGATTTCCCTTAACACATATTCCTACGAACTTTTGTCGAGAAAATTTGGTTTTCATTGAGTTAGAGAACAGCAATGTCCAACGTATGTGGAAAGATCCCCAGATGATGGGAAATTTGAAAATTCTCAATCTTAGTCATTCTCATTGTCTGACACACACCCCAGACTTTTCGTACATGCCTAATCTTGAAAAGCTAGTACTGAAAAATTGTTCAAGGCTGTCTGAGGTTTCTCCTAGCATTGGACATCTCAATAAAAGTCTTCTGATAAATTTAGAAGACTGCATTAGCCTATGTAGCCTCCCAAGAAGTATCTATAGGTTGAAATCTTTAAAAACTCTCGTTCTTTCAGGTTGTTTAAAGATTGACAAGTTGGAAGAGGACTTGGTACAGTTGGAATCTTTAACTACTCTGCTTGCAGATAACACTGCAATCACAAGAGTTCCTTTTTCAATAGTGCGGTCAAAAAGCATTGGATATGTTTCTCTGTGCGGCTACAAAGGATTTTCACGTGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCATCAAATAATCTCTCATCCCAATTTCAAGCATCTTCTCTCATGTCATCTCTTGTTGCTTTAGATGTACCAAGTAGTAGTTCCCATGAACTATCGGCTTTTTCTAACCACCTTCCGAGGCTTCGAAGTCTTTGGGTGGATTGCAAATCTGAAGATCAACTTTCTCTAGATGCAAAAATAATTGTGGATACTTTATATGCCACAGTTTCCAAGGAATTGGAATCAACTGCAACTACATCACAAGTATCAAATGTTAGCACATCTACATTAATTCAATGTTGCAGTCAAGTGAATGTTTCAAGATCAAAACATTCCTTTAAGTCTCTTTTAATTCAAATGGGAATGAATTGTCAAGTTACCAATATTCTGAAAGAGATGATTTTACAGAATAAGGATATCAATGGGAGTGGTGGATATTTGTTCCCCGGTGATAGTTATCCAAATTGGTTAACCTTTCATTCTGAAGGTTCTTCAGTAACTTTTAAAGTCCCTCAAATGGAAGGGCGTAACTTAAAATCAATGATGTGCATTGTCTATACTTCAACCTCAAATAACATAACATCAGATGGCCTTAAAAACGTATTAGTGAAAAATTACACAAAGACTACCATTCAACTTTATAAGAGAGAGGCATTAGTCTCATTTGAAGATGAGGAAGGGCAGAGGGTAGTATCAAGTATGGAACCCGGTGACAAAGTGGAGGTCCTTGTTATTTTTGAGAATGGTTTCATTGTAAAGAAGACATCAGTTTATCTCGTATATGATGAACCAATTGATAAAAAGTTGGAGCTACATCATGTACCAGATTTGAGTGGCATTGCTTGCAGAGGCACTGAAAATGAACTCTCTGTCAAGAGATTCTCTATTGAAGAAGAATCCACCAATGACTTCAATCAGAACAGAAGGAAGAAAAATCGAATGGAATGA 3513 0.3857 MVSRASFKIRWATFYGFRYRATRHLFPRSSCLVLGVRGCVKSPTLDNIWPGHVLISGGNPHPISRFCRDELGPTTLLNTRASFTSHLYASLQNEGIRVYIDGCSLPRGDHISTSLRQAIEVEQSQISVIVFSANYAQSCWCVEELLLIMQCHRNIGQIVLPVFYDVDPSEVRHQTGEFGKGFQKLLEKFCNEGLGDHPPGLVWWLDGCVSRDNWKSFVTRGCPKRSWRTEICEAASLAGFVIPNSRNESEAIKSIVENVTHFLDKTHLFIANNPVGVETRVKEMIQMIGRDQDIQQSDDILLLGMWGMGGVGKTTIAKAIYNEISRNFEGRSFLANIREVWEQNVGQVGLQEQLLFDICKTKTSKIQSTEYGKIILKERLCHKRVLIVLDDVNTLDQLNALCGNRNWFGPGSRIIITTRDRHILRGNRVNQVYKMKHMDESESIELFSWHAFKQASPTNDFVEISRNVVEYSGGLPLALEVLGSYLFDREVREWLCVLEKLKRIPNDQVQKKLKISYDGLNDNTEKETFLDIACFFIGMDRNDVTLILNGCGLFSDIGISILVGRSLVTIDHQNRLRMHDLVRDMGREIIREKSPEEPEVRCRLWFEEDVIDILSDQSVRISYTSSIKGLALKLPKAKAKCFSTKAFKKMTKLRLLQLAGVKLDGDFEYLSKNLRWLSWNGFPLTHIPTNFCRENLVFIELENSNVQRMWKDPQMMGNLKILNLSHSHCLTHTPDFSYMPNLEKLVLKNCSRLSEVSPSIGHLNKSLLINLEDCISLCSLPRSIYRLKSLKTLVLSGCLKIDKLEEDLVQLESLTTLLADNTAITRVPFSIVRSKSIGYVSLCGYKGFSRDVFPSIIWSWMSPSNNLSSQFQASSLMSSLVALDVPSSSSHELSAFSNHLPRLRSLWVDCKSEDQLSLDAKIIVDTLYATVSKELESTATTSQVSNVSTSTLIQCCSQVNVSRSKHSFKSLLIQMGMNCQVTNILKEMILQNKDINGSGGYLFPGDSYPNWLTFHSEGSSVTFKVPQMEGRNLKSMMCIVYTSTSNNITSDGLKNVLVKNYTKTTIQLYKREALVSFEDEEGQRVVSSMEPGDKVEVLVIFENGFIVKKTSVYLVYDEPIDKKLELHHVPDLSGIACRGTENELSVKRFSIEEESTNDFNQNRRKKNRME 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00029 1170 Coils Coil 801 821 - -
Vivi364g00029 1170 SMART till_3 79 224 IPR000157 GO:0007165
Vivi364g00029 1170 Pfam TIR domain 78 189 IPR000157 GO:0007165
Vivi364g00029 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 78 929 IPR044974 GO:0006952
Vivi364g00029 1170 Gene3D - 260 432 IPR027417 -
Vivi364g00029 1170 Gene3D - 76 259 IPR035897 -
Vivi364g00029 1170 ProSiteProfiles TIR domain profile. 58 263 IPR000157 GO:0007165
Vivi364g00029 1170 PRINTS Disease resistance protein signature 379 393 - -
Vivi364g00029 1170 PRINTS Disease resistance protein signature 302 317 - -
Vivi364g00029 1170 PRINTS Disease resistance protein signature 785 801 - -
Vivi364g00029 1170 PRINTS Disease resistance protein signature 472 486 - -
Vivi364g00029 1170 SUPERFAMILY L domain-like 577 909 - -
Vivi364g00029 1170 Gene3D Ribonuclease Inhibitor 619 954 IPR032675 -
Vivi364g00029 1170 Gene3D - 437 521 IPR042197 -
Vivi364g00029 1170 Pfam NB-ARC domain 297 517 IPR002182 GO:0043531
Vivi364g00029 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 532 IPR027417 -
Vivi364g00029 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 80 186 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00029 58 831 WRKY Transcription Factor Family AT4G12020 29.198 6.43e-82 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00029 - - tpra:123910008 1528.07