Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00028 ATGAAAAAGGAGGCAGATTTCGATTTACTGTGTGAAAAGAGATGGAGAGTGATGCTTCGTCTGACAGCTAACACCGCAGGGTTCGTAATACTAAACTCCAGGAATGAAAGTGAGGATATCAAAACAATTGTTGACAAAGTTTCACATTTGCTAAATAAGTCAGACTTGTTTATTGCACATAATCCCGTGGGAATTGAATCTCGAGTGCAAGATGTCATTCAACTTCTACCCATTCAATCAAATGATGTTTTACTACTAGGGATGTGGGGCATGGGGGGAATTGGCAAAACAACCATCGCAAAAGCCATTTACAATAAAATTGGCTGCAATTTTGAAGGTAGGAGCTTCATTGCTAATATTAGGGAAAATGGGGAGAAAATTAATGGACTAGTGAGTTTACAAGAGCAACTTCTATTTGATATCTGCAAAGAAACGACAATCAAGATACCAAACATTCAGTCAGGAATAACAATGTTACGGTCTAGACTCAGCTTAAAAAAAGTACTCATTGTACTTGATGATATAAATAAGTTAGAACAACTGCATGCTTTCTGTGGAAGTTTTAGATATCCAGAATGGTTTGGTCCAAGGAGTATAATAATTATCACAACCAGAGATAAGCGTTTACTTAAGGGGAGAGTTGATAAAATATACGATATGTCAATAATGACTGAAAGTGAATCACTAGAGCTTTTTAGTTGGAATGCGTTCAAGCAAGCAAGTCCTATGGGAGATTTTGATAGAATTTCCAGAAATGTAGTTAAATATTCTGAGGGATTGCCGCTAGCCCTTGAAGTCCTTGGGTCGTATTTGTATCATAAGACGGAATCAGAGTGGAAACTTGTATTGGAGAAACTCCAAAGAATTCCTAATAACCATGTGCAGAATAAGTTAAGAATAAGTTATGATGGTTTAAATGATGATGATGAGCAAGAAATATTCCTTGATATAGCTTGTTTCTTTATTGGGATGGATCGAAATGATGTTATACTTATATTGAAAGACCGTGGACTTTCTGCTGAAATTGGAATACGTGTCCTTGTTGAGCGAAGTCTTGTGACTGTTGATGATAAGAACATTCTTGGAATGCATGGTTTGATGCGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACCATGGAGGCCCGAGGAGCGTAGCAGGTTGTGGTTTTATGATGATGTGATTGACGTATTATCAAAACAAAATGGAAAAGAAGGTGTTTTGGGTTTGGCTTTAAAGCTGCCTATAGCTAATGCAAAATGTTTTAGCACTAAAGCATTTGAGAAGATGGAGAGACTCCGATTCCTTAAACTTGATGAGGTATTACTTGTTGGAGATTTTGAATATGTTTCTAGAGACCTGAGATGGCTGTCATGGAATGGATTAAGTCAAATTCCTAGAAACTTTTTTAGAGAAAATTTAGTTTCTATCGAATTGGAGAACAGTCAAGTCAAACTTCTATGGAAGAAAACTCTGAGGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCACTTTCTCACACGAAGCCCCGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTTAAAGATTGTCCATTGCTGTCTAAGATTTCTCCAAGCATTGGACATCTCAATAAAATTCTTCTAATAAATTTGGAAGATTGTAGTGGCCTACGTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCAGGTTGTGTACATATTGACGAGTTGGAAGAAGAACAAATAGAATCTTCAACCACTCTCCATGAAAATATAACTCCAATAACAAGAGTATCCTTTTTAGTAATAAGGTCAAAAAGCATTGGATATATTTCTCTGTGCGACTGTGAGGGATTTTCACGTTATGTGTTTCTATTTATCATTTGGCTTTGGATGCTGAGATATGCATTGATTTGTATATAA 1941 0.3637 MKKEADFDLLCEKRWRVMLRLTANTAGFVILNSRNESEDIKTIVDKVSHLLNKSDLFIAHNPVGIESRVQDVIQLLPIQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGCNFEGRSFIANIRENGEKINGLVSLQEQLLFDICKETTIKIPNIQSGITMLRSRLSLKKVLIVLDDINKLEQLHAFCGSFRYPEWFGPRSIIIITTRDKRLLKGRVDKIYDMSIMTESESLELFSWNAFKQASPMGDFDRISRNVVKYSEGLPLALEVLGSYLYHKTESEWKLVLEKLQRIPNNHVQNKLRISYDGLNDDDEQEIFLDIACFFIGMDRNDVILILKDRGLSAEIGIRVLVERSLVTVDDKNILGMHGLMRDMGREIIREESPWRPEERSRLWFYDDVIDVLSKQNGKEGVLGLALKLPIANAKCFSTKAFEKMERLRFLKLDEVLLVGDFEYVSRDLRWLSWNGLSQIPRNFFRENLVSIELENSQVKLLWKKTLRMEKLKILNLSHSHFLTRSPDFSNMPNLEKLVLKDCPLLSKISPSIGHLNKILLINLEDCSGLRSLPRSIYKLKSLKTLILSGCVHIDELEEEQIESSTTLHENITPITRVSFLVIRSKSIGYISLCDCEGFSRYVFLFIIWLWMLRYALICI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00028 646 Gene3D - 29 217 IPR027417 -
Vivi364g00028 646 SUPERFAMILY "Winged helix" DNA-binding domain 294 399 IPR036390 -
Vivi364g00028 646 PRINTS Disease resistance protein signature 564 580 - -
Vivi364g00028 646 PRINTS Disease resistance protein signature 85 100 - -
Vivi364g00028 646 PRINTS Disease resistance protein signature 162 176 - -
Vivi364g00028 646 PRINTS Disease resistance protein signature 257 271 - -
Vivi364g00028 646 Gene3D - 222 306 IPR042197 -
Vivi364g00028 646 Gene3D Ribonuclease Inhibitor 419 601 IPR032675 -
Vivi364g00028 646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 595 IPR044974 GO:0006952
Vivi364g00028 646 SUPERFAMILY L domain-like 413 624 - -
Vivi364g00028 646 Pfam NB-ARC domain 66 295 IPR002182 GO:0043531
Vivi364g00028 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 317 IPR027417 -
Vivi364g00028 646 SMART AAA_5 82 224 IPR003593 GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00028 13 585 WRKY Transcription Factor Family AT4G12020 34.286 3.42e-79 273