Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00027 ATGGAACCATTGATTAACTTCAGAACCTTTATCACCACTCTCCTATACTTTTCCATCTCCCTCTTTCCCCTTCAAGCCTACGACCCAGTGGACCGTTATACCCTTAACTGCGGCACAACAGGAAACTCTACCGACGGAGAAAGAACATGGACAGGAGACACAAACTCAAAACTTTTGTTATCACCACAAAACAACAACCCAACAACTATTTCTGTTCCAACAACATCACAAAAACCTTCCATCAACAAAATCCCTTATTCAACAGCTCGTTTATCACACTCAATATTCAACTACTCTTTCCCAGTCACTCAAGGTCCTAAGTTCCTCCGTCTTTTTTTCTACCCTTCTACCTATTCCAACGGTTTCAACCGTTACGATGCTTCCTTCACCGTGGTATCTAATGGATTCACACTTCTGAAGGATTTTAATGCTTCGTTAAACGCTGATGTTGAAGGGGTTGATACTTTATTCAAAGAATATGCTATCAACGTTGGTGATGATCAAAGGCTTGATTTGAGTTTTATTCCAAGTAGTGGAAATTCTAATAACTATGCTTTCATTAATGGAATTGAAGTCTTATCTATGCCGGATGATCTCTATTATACATCATCCACTGATCCTGGTTTTTCACTTGTGGAGTCCACTATCATACCAGCTTATACTATTTCAACCAACGTTGCACTAGAAACAGATTACCGGATCAAAGTTGGAGTGCAGGCAAACTCACCAAATATTCAAGACACAGGCATGCTCAGAAACTGGAACCAAAATGATATAGACTATGTAAGAACACCAACATCACGCCATTTTGACTTTGTCTCTGAAGACTTAATAGGGAGGAACATCACCGTAAAACCCGATTACATCGCACCCAAAGACCTCTACAGAACATCACGTGACTTGGGCATCAATGCCACTCTCAACAAACTCTTGAACTTAACTTGGGAGTTCCCAGTTGATTATGGTTTCTATTACTTGATCAGGCTCCATTTCTGTGAACTCGACCCCAGCATAACTATCGTAGGTGATAGAGTCTTCATCATCTATTTACAAGGAAACGTGGCGGAAGATCATGCTGATGTTATGAAATGGACCCAAGATCAAAATGGTCTTGCTGTACAAAGAAACTACACCGTATACATTCCAAAGAGTAATAATAAGGGTAACAAGAAAGCTAGCCTCTCTCTTCAGTTGCATCCATATGCTGATCGTAGAGACACCATATACAGCGACCCGTTTTTAAATGGACTTGAGATTTTCAAAATCAGTGATGTGGGTTCAAAGAATCTAGCTGGACCCAACCCGGATCCAGTTCAAAATCCGAATAAACATCAAAAGAAAAAAAGCATAAGTGGAACGACAATTATCAGCGTCGTTTTGGGAATTGTATTCGGCGTCGTTTTATTTTCTCTTGTCCTTTTATTCGTTTTTAGGCAAAAACGAAAAACGGAATTGAAAAAGGCGAAATCAACCAACACTCAAAACTCACCTCTACCTTCGGGACTCTGCCGCAGGTTTTCCTTCCACCAGATACGCACCGCTACGAACAACTTCGACGAACTCTTCATCATCGGCGTAGGAGGATTCGGCCACGTCTACAAAGGGTACATCGACAACGGTTTAACACCGGTCGCAATCAAAAGACTCAAACCGGGTTCACAGCAAGGAGAAAACGAGTTCATCAACGAGATTGACTTGCTCTCTAACCTCCGTCACGTCCACCTCGTTTCTTTAATTGGTTACTGCAACGACAATAATGAAATGATCATCGTCTACGATTTCATGACGCGTGGAACTTTACAAGATCATCTATATAACACGGATAACCCAGAATTATCATGGAAACAGCGGTTGAAGATTTCAATAGGCGCTGCGCGTGGTTTACACTACCTTCATTCATGTGCGAAACGGACGATCATTCACCGTGACGTGAAGAGCACGAATATTCTGTTAGATGAGAAATGGATCGCCAAGGTTTCTGATTTTGGACTTTCTCGAATTGGACCTTCAGGTGTATCAAAGTCTTATGTTAGCACTGTTGTGAAAGGTAGCGTTGGTTATTTAGATCCAGAGTATTACAAACGACATCGTTTAACTGAGAAATCTGACGTGTACTCTTTTGGAGTGGTTTTATTTGAGATACTCTGCGCTCGGCCACCTATTCTTAGAACTGCGGAGAAGAACCAGGTGTCACTCGCTGATTGGGGGACAGATTGTTATAAAAGTGGGACACTCGAGACTATGGTGGACCCTTCTATGAAGGGCAGTATAGCGCCTGAGTGTTTGAAAAAATTTGGTGAAATTGCTGCTAGTTGTTTGGTAGATGATGGAAGGATGAGACCGTCGATGAACGACGTCGTTTGGACGTTAGAGTTTGCGTTGCAGTTACAAGAGACTGCGGATCAAGGTCAACATGTTGCTGTTGAGAATGATGACGTGAAAGATGGTCCTAAAAAAGACGAGGATGAAGTGTTTAGTAGTAAGAGTGCAACCTATTCAGGAAATGTTTCAGATTTTAGTAAGAGTGCTGTGATGAGTTTAGACTAG 2547 0.4166 MEPLINFRTFITTLLYFSISLFPLQAYDPVDRYTLNCGTTGNSTDGERTWTGDTNSKLLLSPQNNNPTTISVPTTSQKPSINKIPYSTARLSHSIFNYSFPVTQGPKFLRLFFYPSTYSNGFNRYDASFTVVSNGFTLLKDFNASLNADVEGVDTLFKEYAINVGDDQRLDLSFIPSSGNSNNYAFINGIEVLSMPDDLYYTSSTDPGFSLVESTIIPAYTISTNVALETDYRIKVGVQANSPNIQDTGMLRNWNQNDIDYVRTPTSRHFDFVSEDLIGRNITVKPDYIAPKDLYRTSRDLGINATLNKLLNLTWEFPVDYGFYYLIRLHFCELDPSITIVGDRVFIIYLQGNVAEDHADVMKWTQDQNGLAVQRNYTVYIPKSNNKGNKKASLSLQLHPYADRRDTIYSDPFLNGLEIFKISDVGSKNLAGPNPDPVQNPNKHQKKKSISGTTIISVVLGIVFGVVLFSLVLLFVFRQKRKTELKKAKSTNTQNSPLPSGLCRRFSFHQIRTATNNFDELFIIGVGGFGHVYKGYIDNGLTPVAIKRLKPGSQQGENEFINEIDLLSNLRHVHLVSLIGYCNDNNEMIIVYDFMTRGTLQDHLYNTDNPELSWKQRLKISIGAARGLHYLHSCAKRTIIHRDVKSTNILLDEKWIAKVSDFGLSRIGPSGVSKSYVSTVVKGSVGYLDPEYYKRHRLTEKSDVYSFGVVLFEILCARPPILRTAEKNQVSLADWGTDCYKSGTLETMVDPSMKGSIAPECLKKFGEIAASCLVDDGRMRPSMNDVVWTLEFALQLQETADQGQHVAVENDDVKDGPKKDEDEVFSSKSATYSGNVSDFSKSAVMSLD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00027 848 FunFam receptor-like protein kinase FERONIA 479 594 - -
Vivi364g00027 848 Pfam Malectin-like domain 35 422 IPR024788 -
Vivi364g00027 848 FunFam Receptor-like protein kinase FERONIA 595 812 - -
Vivi364g00027 848 ProSiteProfiles Protein kinase domain profile. 518 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi364g00027 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Vivi364g00027 848 SMART serkin_6 518 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi364g00027 848 MobiDBLite consensus disorder prediction 805 826 - -
Vivi364g00027 848 ProSitePatterns Protein kinases ATP-binding region signature. 524 547 IPR017441 GO:0005524
Vivi364g00027 848 PANTHER OS03G0124300 PROTEIN-RELATED 8 489 IPR046957 GO:0004672
Vivi364g00027 848 Gene3D Phosphorylase Kinase; domain 1 477 594 - -
Vivi364g00027 848 SUPERFAMILY Protein kinase-like (PK-like) 491 793 IPR011009 -
Vivi364g00027 848 CDD STKc_IRAK 524 791 - -
Vivi364g00027 848 Gene3D Transferase(Phosphotransferase) domain 1 595 815 - -
Vivi364g00027 848 Pfam Protein tyrosine and serine/threonine kinase 524 788 IPR001245 GO:0004672|GO:0006468
Vivi364g00027 848 MobiDBLite consensus disorder prediction 803 827 - -
Vivi364g00027 848 Gene3D - 227 423 - -
Vivi364g00027 848 Gene3D - 32 196 - -
Vivi364g00027 848 FunFam FERONIA receptor-like kinase 226 423 - -
Vivi364g00027 848 FunFam FERONIA receptor-like kinase 32 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00027 18 844 Receptor kinase-like Gene Family AT3G51550 46.613 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi364g00027 Malectin_like 7.5e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00027 - - vvo:131630062 1405.58