Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00024 ATGCATTTCTCCAATGACTTACCCCAAGACGCCGAAATAATTTCATTTGATGAAGATGATACAGTAAAAATCCAATCAAGGATCCATGATGTGTTTCTAAGCTTCAGAGGCGAAGATACACGTTCTTCCTTCACTTCACATCTCTACGCTTCTCTTCAAAACGCCGGAATTGATGTGTTTAAGGACGATCATTCACTTCAAAGAGGAGATACCATTTCATCTTCACTTATTCAAGCAATCGAAGGTTCTCGCATTTCTATTATCGTTTTTTCAATCAATTACGCCGGATCGCGATGGTGTCTTCTAGAGTTGGTGAAAATAATGGAGTGTCACAGAACCACGGGCCAAATTGTTCTACCGGTGTTCTACGGTGTTGATCCGTCTGAAGTTCGTCATCAGAGAGGTGAATTTGGAAAAGCGTATGGTGATCTTTTGAATAAGATTTCAATGGAGGAGAATGAAGATGATGAAATGCTGGATTTAGAATTGAGGATAGGTTCTGTAAACTCGCTTCGTCAATATCCAGAGCTTCATGAGGCCGCTAGCCTTTCTGGCTTCGTGGTCCTGAATTCCAGGAATGAAAGTGAGGCCATCAAGGATATTGTTGAAAATGTTACACGTTTGCTTGACAAGACAGACCTATTTATTGCTAATAATCCAGTGGGTGTTGAATCTCGAGTGGAAGATATGATTCAATTGTTAGAACAAGATATCCAACAATCAAATGACGTTCTCCTATTAGGGATGTGGGGTATGGGAGGAGTTGGTAAAACTACCATTGCCAAAGCCATTTATAATAAAATTGGCCGCAATTTTGATGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGGCTGGTGTTGGTCAAGTGAATTTACAAGAACAACTTCTCTCTGATATTTGCAAAGAAATGACAACCAAGATACAAAGCATTGAAAAAGGAAAAATCATATTACAGGATAGGCTCTGCCATAAAAGAATACTAATTGTACTTGATGATGTTAATACGTTGGACCAACTCAATGCCTTGTGTGGAAGTCATAAATGGTTTGGTTCGGGGAGTAGAATAATTATCACAACAAGAGATAGACACATACTTCGTGGGAATAGGGTTAATCAAGTATATGAAATGAAGAATATGGATGATAGGGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAGGTCCTACAAAAGATTTTGTTGGAATTTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCATTGGCTCTGGAAGTCCTTGGGTCATATTTGTTTGATAGGGCGGTAACTGAGTGGCATTCTGTATTGGAGAAACTAAAAAGAATTCCTAATGACCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGACACCGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATGCTTGTACTAAATGGCTGTGGACTTTTTGCAGAAATTGGAATAAGTATTCTTATTGAGCGAAGCCTTGTAATTGTTGATGATAAGAACAAGCTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACCAAGGGTGCTTGAAAAGCGTAGCAGGTTGTGGTTTCATGATGATGTGCATGAAGTATTATCAGACCAATCTGGAACAAAAGCTATCAAGGGGCTGGCTTTGAAGTTACCAAGAGCTTATGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGACGCAACTCAGATTGCTTCAACTTGCTGGAGTGAAACTTGATGGAGATTTTGGATATCTTTCACCAAAACTGAGGTGGCTATCTTGGAACAAATTTCCTTTAACACATATACCTACAAACTTTCGTCGAGAAAATTTGGTTTCCATCGAGTTAGAGAGCAGCAATATCAAAATTCTATGGAAAGAGGCCCAGATGATGGGAAATCTTAAAATTCTCAACCTTAGCCATTCACATTATTTGACACACACTCCTGACTTTTCATACATGCCTAATCTTGAAAAGCTAGTACTCAAGGATTGCCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGACATCTCAATGAAATTCTTCTGATAAATTTGGAAGATTGCATTAGCCTTTCTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCATTGAAAACTCTCATTCTTTCTGGTTGTATAAAGATTGACAAGTTGGAAGAGGATTTGGAACAAATGGAATCTTTAACCACCCTACTTGCAAATAACACTGCAATAACAAGAGTGCCCTTTTCAGTGGTAAGGTCCAAAAGCATTGGATATATTTCTCTGTGCGGCTATCAAGGATTTTCACGTGATGTGTTTCCATCTATCGTTTGGTCTTGGATGTCACCATCAAATAATCTCCCATCCCAATTTCAAACATCTGCTGCCATGTCATCCCTTGTTTCTTTTGATGTACCAAGTAGTAGTTCACATGAACTATCATCTTTTTCTTACCACCTTCCTTGGCTTCGAAGTCTTTGGGTGGATTGCAACTCTGAAGACCAACTTTCTCTAGATGCTAAAATAATTTTGGATGCTTTATATGCTACAGTTTCTAAGGAAATTGAATCAACTGCAACTACATCACAAGTATCAAATATGACTACTTCTACATTGATTCAATACAGCAGTCAAGTGCAGGTTTTGGGTTCAAAACATTCCTTAAAGTCTCTTTTAATTCAAATGGGAATGGATTGCCAAGTCACCAATATTCTCAAAGAGAAAATTTTACAGAATATGGATGCCAATGGGAGTGGTGGTTGTTTGTTCCCTGATGATAGTTATCCAGATTGGTTAACCTTTAATTCCGAAGGTTCTTCGGTAACTTTTAAAGTCCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGTATTGTCTATACTTCCACCCCAGATAACATAACAACAGATGGCCTTAAAAATGTGTTGGTGAACAATTTCACAAAGGCCACCATTCAGCTCTATAAGAGAGAAGCATTACTCTCCTTTAAAGATGAAGAGAGCCAGAGAGTAATATCAAGTTTAGAACCCGGTAACAAAGTGGAGGTGGTTGTTGTTTTCGAGAACAGTTTCATTGTGAAGAAGATAGCGGTTTATCTTGTATTCGATAAACCAATTGGTAAAACTGATCTATATCAATTACCAGATTTGAATGTCATTGCTTGTAGCAAGGATAAAAATGAAAGCTCTATCAAGAGATTTCTTACTCAAGAAGAGCCCACCGATGACTTCAATCAAAACAGAAAGAAGAAAAATCGAATGGAATGA 3330 0.3799 MHFSNDLPQDAEIISFDEDDTVKIQSRIHDVFLSFRGEDTRSSFTSHLYASLQNAGIDVFKDDHSLQRGDTISSSLIQAIEGSRISIIVFSINYAGSRWCLLELVKIMECHRTTGQIVLPVFYGVDPSEVRHQRGEFGKAYGDLLNKISMEENEDDEMLDLELRIGSVNSLRQYPELHEAASLSGFVVLNSRNESEAIKDIVENVTRLLDKTDLFIANNPVGVESRVEDMIQLLEQDIQQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFDGRSFLANIREVWEAGVGQVNLQEQLLSDICKEMTTKIQSIEKGKIILQDRLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRIIITTRDRHILRGNRVNQVYEMKNMDDRESIELFSWHAFKQAGPTKDFVGISKNVVEYSGGLPLALEVLGSYLFDRAVTEWHSVLEKLKRIPNDQVQKKLKISYDGLSDDTEKEIFLDIACFFIGMDRNDVMLVLNGCGLFAEIGISILIERSLVIVDDKNKLGMHDLLRDMGREIIREESPRVLEKRSRLWFHDDVHEVLSDQSGTKAIKGLALKLPRAYAKCFSTKAFKKMTQLRLLQLAGVKLDGDFGYLSPKLRWLSWNKFPLTHIPTNFRRENLVSIELESSNIKILWKEAQMMGNLKILNLSHSHYLTHTPDFSYMPNLEKLVLKDCPMLSEVSPSIGHLNEILLINLEDCISLSSLPRSIYKLKSLKTLILSGCIKIDKLEEDLEQMESLTTLLANNTAITRVPFSVVRSKSIGYISLCGYQGFSRDVFPSIVWSWMSPSNNLPSQFQTSAAMSSLVSFDVPSSSSHELSSFSYHLPWLRSLWVDCNSEDQLSLDAKIILDALYATVSKEIESTATTSQVSNMTTSTLIQYSSQVQVLGSKHSLKSLLIQMGMDCQVTNILKEKILQNMDANGSGGCLFPDDSYPDWLTFNSEGSSVTFKVPQVEGRNLKTMMCIVYTSTPDNITTDGLKNVLVNNFTKATIQLYKREALLSFKDEESQRVISSLEPGNKVEVVVVFENSFIVKKIAVYLVFDKPIGKTDLYQLPDLNVIACSKDKNESSIKRFLTQEEPTDDFNQNRKKKNRME 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00024 1109 SMART till_3 28 168 IPR000157 GO:0007165
Vivi364g00024 1109 MobiDBLite consensus disorder prediction 1089 1109 - -
Vivi364g00024 1109 PRINTS Disease resistance protein signature 246 261 - -
Vivi364g00024 1109 PRINTS Disease resistance protein signature 323 337 - -
Vivi364g00024 1109 PRINTS Disease resistance protein signature 416 430 - -
Vivi364g00024 1109 PRINTS Disease resistance protein signature 725 741 - -
Vivi364g00024 1109 ProSiteProfiles TIR domain profile. 27 209 IPR000157 GO:0007165
Vivi364g00024 1109 Coils Coil 741 761 - -
Vivi364g00024 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 142 IPR035897 -
Vivi364g00024 1109 Gene3D - 23 213 IPR035897 -
Vivi364g00024 1109 Gene3D - 381 465 IPR042197 -
Vivi364g00024 1109 SUPERFAMILY L domain-like 537 856 - -
Vivi364g00024 1109 Gene3D - 214 376 IPR027417 -
Vivi364g00024 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 476 IPR027417 -
Vivi364g00024 1109 SUPERFAMILY "Winged helix" DNA-binding domain 452 558 IPR036390 -
Vivi364g00024 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 868 IPR044974 GO:0006952
Vivi364g00024 1109 Gene3D Ribonuclease Inhibitor 579 910 IPR032675 -
Vivi364g00024 1109 Pfam NB-ARC domain 227 461 IPR002182 GO:0043531
Vivi364g00024 1109 Pfam TIR domain 29 147 IPR000157 GO:0007165
Vivi364g00024 1109 SMART AAA_5 243 383 IPR003593 GO:0016887
Vivi364g00024 1109 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 211 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00024 26 771 WRKY Transcription Factor Family AT4G12020 31.062 1.64e-85 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00024 - - tpra:123910008 1603.96