Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00023 ATGTCTTCCTCAAAGCTTCCATCTATTGTGCCACTTCAACCCAAAAGCGGACAGATTAGAAGAAAAGTTTTAAAAGACTTAGCGAGAGATAAAAAAAAGGACAAAAAATTCGACATATTGAAGGAATTAAAATGGGATAAAGCGCGGTTACGAAGTATTGTAACAGAAGACTATCGTTATCCGCGCGTTTTACGTTTTAAAGCTTCTCTTCAACTGTTCCGTGAAATGGAAACGTTCATCAAAAGTTTGAGAGAAGAAAACACAGATGCATCTTTCACTTCACAATCTATTCCATACCTTAAATCTCTCATTTCAGAACTCACTTCTTCTCTTCAAGTGGACGTCAATAGAGAGATCCTTTTAGAAATAGAACCGAAACCATTTCCCACTTTACGTCTCCGTCGTTCTCTTAAAAAACTTAAAGTATTGTTAAGAGGAGAAGTCACACGTGCATCTTTCACTTCACTTATCCGTGGTTGCATTAAAGGCTATGAATATGCCATTTCAGAATTCTATGCTTCTTTTCAAGAGGACGGGTTTGACGTTAATAGAGTGATCAACGAACATGAAGTATTCTTAAGTTTTAGAGGAGATGACACTCGTGCATCTTTCACTTCACATCTCCATGCTTCTCTTCAAAACGATGGAATCTCTGTTTTCATGGACGAGGATTCGCTTCTAAGAGGAAATCACATTTCATCATCACTTCTGCGAGCAATTGAAGACACTAAGATCTCTGTGGTTGTTTTCTCAAGAAATTATGCTGAGTCGAGATGGTGTTTGGCAGAATTGGTGAAAATAATGTCGTGTCAGAGAACCGTAGGGCAGGTGGTGCTTCCAGTCTTCTATGGTGTAGATCCATCTGAGGTTCGTCACCAAACTGGTGCGTTTGGAGAAGCATTTCGAAGTCTTTTGGATAGGATTTCAAAGGGCAAGAAAAAAAAGTCTCTCAAATGGAGAGAAGCACTTCGTCAAGCTGCTGCCCTCGCTGGTTTCGTAGTTCTAGATGCAAGGAATGAAAGGGAGGCTATCAATCATATTGTTGAAAAAGTTACTCTTTTGCTTGACAAGACACAATTGTTTGTTGCTGATAATCCAGTGGGAGTTGAATCACGAGTGCGAGATATGATTCAACAGCTAGATATCCAACAATCAAATAAAGTTCTACTCCTAGGGATGTGGGGTATGGGAGGAACCGGTAAAACTACCATTACAAAAGCCATTTACAACAAAATTGGCCGCAATTTCGAAGGTAGGAGTTTCCTGGCAAATATTAGGGAAACTTGGGAAGGAACTACTGGAAAAGTGTCTTTACAAGAACAACTTCTGTTGGATATCTTCAAAGAAACAAAAACCAAGATACAAAGCATTGAGTCCGGGAAAATTACATTGAAGAATAGGCTTTGTCATAAAAGAGTACTTCTCATACTTGATGATGTGAATAGTTTGGACCAACTAAAAGCTTTGTGTGGAAGTCGTAAATGGTTTGGTTCTGGGAGTAGAATAATTATCACAACCAGAGATAAACATATACTTAGAGAACTACGAGTTAACAAAGTATACGCAATGAAAGAAATGGATGAAAAGGAATCAATTGAGCTTTTTAGTTTGAATGCATTCAAGCAGCCTAGTCCTAGAAAACAATTTGCTGAAATTTCTAGAAATATTGTTGAATACTGTGGAGGATTGCCACTAGCTCTGGAAGTCATTGGTTCCTATTTGTTTGACAGAGGATTAACAGATTGGAAGTGTGTATTGGAAAAAATCAAAATAATTCCCAATGATCAAGTACAACAGAAGTTAAAAATTAGCTATGATGGTTTACATGATGACCTTGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACAGATATTAAATCCTTGTGGATTTTTTGCAGAAATTGGAATAAGTGTGCTTGTTGAGCGAAGTCTGTTAACTGTTGATGATAAAAACAAGCTTGGAATGCATGATTTGTTAAGAGATATGGGAAGAGAAATCATTCGTGAAAAATCGCCCAAGGAGCCCGAGGAGCGTAGCAGATTATGGTTTCGTGATGATGTGCTTGGTGTTTTATTTGATCAAAATGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAGATGCCAATAGCTAATTCAAAATGTTTTAACACTAGAGCATTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTCTTGGTGTACAACTTGATGGAGATTTTGAATATCTTTCAAGAAATTTAAGATGGCTATGTTGGAATGGATTTCCTTTAACAAGCATACCTTCAAATTTTTATCAAGGAAACTTAGTTTCCATGGAGTTAGAAAACAGCAATATGAGATTTGTGTGGAAAGAGACCCCGAGAATGGAGATGCTGAAAATCCTAAACCTTAGTCATTCCCATCATCTTATGCAGACCCCAAACTTCTCAAATTTGCCTAATCTTGAAAAGCTAATACTTGTAGATTGTCCAATGTTATCTGAGGTTTCCAACAGCATTGGAGATCTCAATAAAATTCTTCTAATAAATTTGGAAGACTGTATTAACCTATGTAACCTTCCAAGAAGCATTTATAAGTTGACATCTCTCAAAACTCTAATTCTTTCAGGGTGTTTAATGATTGACACGTTGGAAGAAGACATAGAACAAATGGAATCTTTAACCACTCTGATTGCAAATAACACTGGAATAACAAGAGTTCCGTTTTCTATAGTGAGATCAAAAAGCATTGGCTACATTTCTTTGTGCGGCTATGAAGGTTTCTCACGGGATGTGTTTCCAGCTATCATTTCGTCTTGGATGTCTCCAACAAATAATTTTACACCCCATTTACAAACATCTACTATTATGTCATCTCTTGTTCCTTTAGATGTACTACATAGTAGTTCCCAGGAGCTATCATCGATTTCCAAGTACCTTCCAAGTCTTAGAAGTCTTTGGGTGGAGTGCAGCTCAGAAGATCAGCTTTCTCATGATACAACAATAATTTTAGAGGCATTATATGCCCTAAATTCTCGAGAATTGGATCCAACAACAACCACATCACAAGTATCAAAAAATTCCTTGAAATCTCTTTTCATTCAACTGGGAATGAATTGCGAAGTTGCAAATATTCTGAAAGAGAAAGTTTTACAGTATATGACCGGCGATGAGAGTGGTGGTTGTGTGCTCCTGGGTGATAGTTATCCCAATTGGTTAAACTTCAATTGTGATGGTTCTTCTGTAAGTTTTGAAGTCCCTCAAGTAGAAGGGCATAACTTGAAGTCATTGATCTGCATTGCCTATTCATCAACTCCGGATAACTTAACTTCGGATGGTCTTAAAAATGTGTTGGTGAAAAATTACACGAAGGCCACCATTCAGCTCTATAAGAAAGAGACACTAGCTTCCTTTAAGGATGAGGAGGGGGAGAGAGTAGTATCAAGTATAGAACCCAGAGATAAAGTGGAGGTGGTGGTTGTTTTTGAGAATGGTTTCAGTGTGAAGAAAACTACAGTTTATCTCGTATATGATGAACCAATGGGAGAAAAAAGGGAACAATGTGAAGCACCAGAAGGAAATATTATTGCTTGTAGTGCTGATGAAAATGAAAGCATACAATGTGAAGCGGCAGATGAAAATGCTATCGCTTATAGTGCGGATGAAAATGAAAGCGTACAATGTGAAGAACCATTACCAGACGAAAATGCTAATGCTTATAGTGCTGATGAAAATGAAAGCATATTAAGGACGAGCTCTCCACAAGTGGAACTCGTGGAAAAAAATGTTAGTGCCGGTAGTTGTTGTGGATCTGTCAAATATAGTTTTAGACAGTGGATTACAAATTTTATGTGTAGATTAGTGGAGTGCTGGGGATAG 3891 0.3752 MSSSKLPSIVPLQPKSGQIRRKVLKDLARDKKKDKKFDILKELKWDKARLRSIVTEDYRYPRVLRFKASLQLFREMETFIKSLREENTDASFTSQSIPYLKSLISELTSSLQVDVNREILLEIEPKPFPTLRLRRSLKKLKVLLRGEVTRASFTSLIRGCIKGYEYAISEFYASFQEDGFDVNRVINEHEVFLSFRGDDTRASFTSHLHASLQNDGISVFMDEDSLLRGNHISSSLLRAIEDTKISVVVFSRNYAESRWCLAELVKIMSCQRTVGQVVLPVFYGVDPSEVRHQTGAFGEAFRSLLDRISKGKKKKSLKWREALRQAAALAGFVVLDARNEREAINHIVEKVTLLLDKTQLFVADNPVGVESRVRDMIQQLDIQQSNKVLLLGMWGMGGTGKTTITKAIYNKIGRNFEGRSFLANIRETWEGTTGKVSLQEQLLLDIFKETKTKIQSIESGKITLKNRLCHKRVLLILDDVNSLDQLKALCGSRKWFGSGSRIIITTRDKHILRELRVNKVYAMKEMDEKESIELFSLNAFKQPSPRKQFAEISRNIVEYCGGLPLALEVIGSYLFDRGLTDWKCVLEKIKIIPNDQVQQKLKISYDGLHDDLEKEIFLDIACFFIGMDRNDVIQILNPCGFFAEIGISVLVERSLLTVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFRDDVLGVLFDQNGTKAVEGLALKMPIANSKCFNTRAFKKMKRLRLLQLLGVQLDGDFEYLSRNLRWLCWNGFPLTSIPSNFYQGNLVSMELENSNMRFVWKETPRMEMLKILNLSHSHHLMQTPNFSNLPNLEKLILVDCPMLSEVSNSIGDLNKILLINLEDCINLCNLPRSIYKLTSLKTLILSGCLMIDTLEEDIEQMESLTTLIANNTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPAIISSWMSPTNNFTPHLQTSTIMSSLVPLDVLHSSSQELSSISKYLPSLRSLWVECSSEDQLSHDTTIILEALYALNSRELDPTTTTSQVSKNSLKSLFIQLGMNCEVANILKEKVLQYMTGDESGGCVLLGDSYPNWLNFNCDGSSVSFEVPQVEGHNLKSLICIAYSSTPDNLTSDGLKNVLVKNYTKATIQLYKKETLASFKDEEGERVVSSIEPRDKVEVVVVFENGFSVKKTTVYLVYDEPMGEKREQCEAPEGNIIACSADENESIQCEAADENAIAYSADENESVQCEEPLPDENANAYSADENESILRTSSPQVELVEKNVSAGSCCGSVKYSFRQWITNFMCRLVECWG 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00023 1296 SUPERFAMILY L domain-like 716 1019 - -
Vivi364g00023 1296 Pfam NB-ARC domain 370 591 IPR002182 GO:0043531
Vivi364g00023 1296 Gene3D Ribonuclease Inhibitor 715 1062 IPR032675 -
Vivi364g00023 1296 SUPERFAMILY Toll/Interleukin receptor TIR domain 188 331 IPR035897 -
Vivi364g00023 1296 Gene3D - 525 609 IPR042197 -
Vivi364g00023 1296 PRINTS Disease resistance protein signature 390 405 - -
Vivi364g00023 1296 PRINTS Disease resistance protein signature 467 481 - -
Vivi364g00023 1296 PRINTS Disease resistance protein signature 869 885 - -
Vivi364g00023 1296 PRINTS Disease resistance protein signature 560 574 - -
Vivi364g00023 1296 SUPERFAMILY "Winged helix" DNA-binding domain 596 702 IPR036390 -
Vivi364g00023 1296 Gene3D - 186 353 IPR035897 -
Vivi364g00023 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 620 IPR027417 -
Vivi364g00023 1296 ProSiteProfiles TIR domain profile. 187 355 IPR000157 GO:0007165
Vivi364g00023 1296 SMART AAA_5 387 527 IPR003593 GO:0016887
Vivi364g00023 1296 Pfam TIR domain 189 351 IPR000157 GO:0007165
Vivi364g00023 1296 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 189 1017 IPR044974 GO:0006952
Vivi364g00023 1296 SMART till_3 188 329 IPR000157 GO:0007165
Vivi364g00023 1296 Gene3D - 354 520 IPR027417 -
Vivi364g00023 1296 FunFam Disease resistance protein (TIR-NBS-LRR class) 186 357 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00023 188 915 WRKY Transcription Factor Family AT4G12020 31.467 4.30e-84 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00023 - - tpra:123910008 1618.59