Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00015 ATGGCTGCTCCTGAGATTAGCTGGAATAGGCTAGATGTAATGAAATTCTATGCAGGGGGAGCTGGACTATTTTCTGGTATTACTGTGTTACTCTACCCTATCTCTGTTGTGAAGACTAGGATGCAGGTTGCTACAAAGGATACTGCAGAGAGAACTGCATCTTCTGTTGTCAAAGGATTGCTTAAGAAAGACGGCATCCGTGGTTTGTATAAAGGGTTTGCGACGGTCATTACTGGAACAATACCTGCCCGAATGGTATTTCTCACTTTCTTAGAGACCATTAAGGAAGCTTCCTTCAAGATGGTTAAACCATTTGAACTATCTGAAACTAGTCAGGCTGCCATAGCGAATGGCATTGCAGGCATGACATCGTCGATTGTGTCACAAGCTGTGTATACTCCAATTGATGTGATTAGCCAAAAGTTGATGGTGCAAGGGTACTCGGGCCATGCCCAGTATAGCGGTGGTTTGGATGTTGCTCGGAAGTTAATAAGGTCCGAGGGCTTCAGGGGACTATACAGAGGGTTTACTCTATCTGTTATGACTTATTCACCATCTAGCGCTGTATGGTGGGCAACTTACGGCTCAAGTCAACGCTTCTTATGGAGATTCTTGGAAGATGATGTCAAATCTGAGGAAGCTACTCCTAGTATGCCAAAGATTATTTTAGTTCAGGCAGGAGGGGGTGTCATTGCTGGTGCTACTGCATCGTGCATTACAACTCCGCTGGATACAATCAAGACACGGCTACAGGTGGTAGGACATGGAAAGAAAATCTCTATTAAACAAGTTGTTAAGGAATTGATCAGCGAGGATGGTTGGAAAGGTGTATATAGAGGATTTTGTCCAAGGTTGTTCAGCACATCAGCATGGGGAACTTCAATGGTATTGGCTTATGAATATCTGAAGCGCCTATGCGTAAAAGATAAAGAAGCAGCTGGTCAGTAA 948 0.4399 MAAPEISWNRLDVMKFYAGGAGLFSGITVLLYPISVVKTRMQVATKDTAERTASSVVKGLLKKDGIRGLYKGFATVITGTIPARMVFLTFLETIKEASFKMVKPFELSETSQAAIANGIAGMTSSIVSQAVYTPIDVISQKLMVQGYSGHAQYSGGLDVARKLIRSEGFRGLYRGFTLSVMTYSPSSAVWWATYGSSQRFLWRFLEDDVKSEEATPSMPKIILVQAGGGVIAGATASCITTPLDTIKTRLQVVGHGKKISIKQVVKELISEDGWKGVYRGFCPRLFSTSAWGTSMVLAYEYLKRLCVKDKEAAGQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Vivi364g00015 315 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Vivi364g00015 315 Gene3D Mitochondrial carrier domain 13 313 IPR023395 -
Vivi364g00015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Vivi364g00015 315 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 311 - -
Vivi364g00015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Vivi364g00015 315 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Vivi364g00015 315 Pfam Mitochondrial carrier protein 228 309 IPR018108 -
Vivi364g00015 315 Pfam Mitochondrial carrier protein 21 100 IPR018108 -
Vivi364g00015 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Vivi364g00015 315 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Vivi364g00015 315 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00015 6 306 Chloroplast and Mitochondria Gene Families AT5G15640 70.957 1.24e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00015 K15121 - gmx:100819519 474.937