Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00014 ATGGCTGCTCCTGAGATTAGCTGGAATAGGCTAGATGTAATGAAATTCTATGCAGGGGGAGCTGGACTATTTTCTGGTATTACTGTGTTACTCTACCCTATCTCTGTTGTGAAGACTAGGATGCAGGTTGCTACAAAGGATACTGCAGAGAGAACTGCATCTTCTGTTGTCAAAGGATTGCTTAAGAAAGACGGCATCCGTGGTTTGTATAAAGGGTTTGCGACGGTCATTACTGGAACAATACCTGCCCGAATGGTATTTCTCACTTTCTTAGAGACCATTAAGGAAGCTTCCTTCAAGATGGTTAAACCATTTGAACTATCTGAAACTAGTCAGGCTGCCATAGCGAATGGCATTGCAGGCATGACATCGTCGATTGTGTCACAAGCTGTGTATACTCCAATTGATGTGATTAGCCAAAAGTTGATGGTGCAAGGGTACTCGGGCCATGCCCAGTATAGCGGTGGTTTGGATGTTGCTCGGAAGTTAATAAGGTCCGAGGGCTTCAGGGGACTATACAGAGGGTTTACTCTATCTGTTATGACTTATTCACCATCTAGCGCTGTATGGTGGGCAACTTACGGCTCAAGTCAACGCTTCTTATGGAGATTCTTGGAAGATGATGTCAAATCTGAGGAAGCTACTCCTAGTATGCCAAAGATTATTTTAGTTCAGGCAGGAGGGGGTGTCATTGCTGGTGCTACTGCATCGTGCATTACAACTCCGCTGGATACAATCAAGACACGGCTACAGGTGGTAGGACATGGAAAGAAAATCTCTATTAAACAAGTTGTTAAGGAATTGATCAGCGAGGATGGTTGGAAAGGTGTATATAGAGGATTTTGTCCAAGGTTGTTCAGCACATCAGCATGGGGAACTTCAATGGTATTGGCTTATGAATATCTGAGTAAGAACTCTTGTTCTCTGATTAGATACTGTCTGTGTTCATAA 951 0.4353 MAAPEISWNRLDVMKFYAGGAGLFSGITVLLYPISVVKTRMQVATKDTAERTASSVVKGLLKKDGIRGLYKGFATVITGTIPARMVFLTFLETIKEASFKMVKPFELSETSQAAIANGIAGMTSSIVSQAVYTPIDVISQKLMVQGYSGHAQYSGGLDVARKLIRSEGFRGLYRGFTLSVMTYSPSSAVWWATYGSSQRFLWRFLEDDVKSEEATPSMPKIILVQAGGGVIAGATASCITTPLDTIKTRLQVVGHGKKISIKQVVKELISEDGWKGVYRGFCPRLFSTSAWGTSMVLAYEYLSKNSCSLIRYCLCS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00014 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Vivi364g00014 316 Pfam Mitochondrial carrier protein 228 303 IPR018108 -
Vivi364g00014 316 Pfam Mitochondrial carrier protein 21 100 IPR018108 -
Vivi364g00014 316 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Vivi364g00014 316 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Vivi364g00014 316 Gene3D Mitochondrial carrier domain 12 308 IPR023395 -
Vivi364g00014 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Vivi364g00014 316 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Vivi364g00014 316 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Vivi364g00014 316 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Vivi364g00014 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Vivi364g00014 316 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 305 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00014 6 309 Chloroplast and Mitochondria Gene Families AT5G15640 69.608 1.42e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00014 K15121 - gmx:100819519 462.611