Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi364g00011 ATGAACAATTTCCAACAGTATCGTCATATATCGGCACCTGGATGGACATTAGGGTGGACATGGGCAAAGACGGAGGTGATATGGAACATGGTGGGAGGGCAGACAACTGAACAAGGAGATTGTTCAAAATTTAAGGGAAACATCCCGCATTGCTGTAAAAAAAATCCAGCTGTGGTAGATTTACTTCCCGGAGTGAATTATAATCAACAAATTGCCAATTGTTGCAAAGGTGGTGTACTCACCTCATGGGCTCAGGATCCAGCAAACGCTGTTTCGGCATTTCAACTCAGCGTTGGTAGAGCTGGCAGCACTAAAAAAACCGTCAGATTGCCGCAGAATTTCACCTTGAGTACACCCGGACCAGGATATACATGCGGGCCAGCGAAAATTGTGAAACCTACTAGATTCATAACACCGGACAAAAAGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAGTTTCTTGCTCAGAAAACTCCCACTTGTTGTGTCGCACTTTCATCTTTCTATAACGATACTATTGTACCGTGCCCGACATGTTCGTGCGGCTGCCAAGGGAACTCAGCCCAAACGGGAAGCTGCGTAGATCCAAGTGCGTCACATTTGGCCTCGGTTGTTTCCAGCCACGACAAGAATAATATTACACCTTTGGTTCGATGTACTAGTCATATGTGTCCGATCCGAGTTCACTGGCACATTAAGCTCAACTACAAGCTGTATTGGCGCGTAAAGGTCACCATTACTAATTTCAATTACAGGATGAATCACTCGAATTGGAACTTGGTTGTTCAGCATCCAAACTTCGACAATCTTACTCAAATTTTCAGTTTCAACTACAAATCATTAAATCCCTACGGCTCAATAAATGATACAGCCTTGCTTTATGGAGTTAAATTCTACAATGATTTCCTCATGCAAGCTGGTCCAATCGGTAATGTACAATCCGAGCTACTTTTCCAAAAGAATACATCAACTTTTACTTTCGAAAAAGGTTGGGCGTTTCCTCGGAGAATCTATTTCAACGGCGACAACTGTGTAATGCCACCGCCTGACGCTTATCCATGGTTACCTAATGCCGGTTCTAAACAAGAGGTTTCCTTCCTTGCTTTGATAATGTCATCCTTGGTGGCAATAGTACTTCACGCATATTCTTAA 1173 0.4322 MNNFQQYRHISAPGWTLGWTWAKTEVIWNMVGGQTTEQGDCSKFKGNIPHCCKKNPAVVDLLPGVNYNQQIANCCKGGVLTSWAQDPANAVSAFQLSVGRAGSTKKTVRLPQNFTLSTPGPGYTCGPAKIVKPTRFITPDKKRVTQALMTWNVTCTYSQFLAQKTPTCCVALSSFYNDTIVPCPTCSCGCQGNSAQTGSCVDPSASHLASVVSSHDKNNITPLVRCTSHMCPIRVHWHIKLNYKLYWRVKVTITNFNYRMNHSNWNLVVQHPNFDNLTQIFSFNYKSLNPYGSINDTALLYGVKFYNDFLMQAGPIGNVQSELLFQKNTSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSKQEVSFLALIMSSLVAIVLHAYS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi364g00011 390 Pfam COBRA-like protein 1 158 IPR006918 GO:0010215|GO:0016020
Vivi364g00011 390 PIRSF COBRA 1 390 IPR006918 GO:0010215|GO:0016020
Vivi364g00011 390 PANTHER PROTEIN COBRA 1 380 IPR006918 GO:0010215|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi364g00011 3 388 COBRA Gene Family AT3G02210 77.519 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi364g00011 - - gmx:100815926 708.753