Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi363g00022 ATGAGCCGAAAATTTAGCTCCCTTAAGGAGCTTAACGATTCAAAGGAAACATGGAGATTGGCCGTTCGAGTTGTTGATTTATGGAGTGTTATCAACAGCAAGGGTAAGGAGCATCTGGAGATGGTTATAATAGACGCATCGGGTGATAGGATACAAGTTTTGATTCGTTCTGACCATACACCGAAATGGAAAGAACGAATACGTGAAAACATGTCGTGCATAATCAACAATGGAACTGTTTATGATAACGATTTCCAGTGGAAGCTTTGTGATCATGACAAGAAGTTTGTGTTTATTGGTGGTACGACTGTGAAGGAAGTTGATATTCAGAACCTTCCTCCCAAAAGATTTTATTTCAAAGACTTTTCTGATATACTTGCAGGCAACTGTGAACTGAACCGACTTGAAGATATTATTGGTGTAGTTCAAGAAATCAACAATTTTCAATATAACAATTTTGGAAAAAAGTCTTTTGTTTCACTAAGTCTTAAAGAAGTGAAAGGTGCCATCGTTAACTGCACGTTATGGGAGAGCTACGGAACAAAAATTTTCGATTTCTACCATGATGAAAAAAACAAGGGTGCTATTGTAATTGTACTAGCTCATGCAATGATAAAGGAATCACAAGTCTCAAATGGATGGAGTGGATCTAAATTGCTAATTAACGAAGACATTCCAGAGATAACTGAGTATTTATCAAAGTTACCTGCAAATGAGCAGACTGAAAAGCCTTCGCAATCCTCAAAGGGTATGTCTCTTTGGTCTGGTGCCTCTCAATTCACCCCAGTTGAAAGTTTCGTCCATAAGGCCAAATGTATATCTCTGAGTGAGCTCTGCAAGGTGAAACAGGACATGTTATGTGTTACTGTTGGAACAACTCAAAAGTTTTTTGTCTCAAAACATGGTTGGTTTTATTATGGATGTACTAAATGTTCTTTAAAGGCATCTGATGTGAACAATCCATACAAATGTTCATGTGGACAGAATGTAGAACATGCCATACCAAGGTATCGAGTTGACATATATGTAATTGATGGTGAATCAAAATTTCGCTTTGTGTTTGGGGATACTGACTGTGCCGACATTATTGGAAAGTCTGCTGATAGTATTTATAAAGCAATGCTTGAGATAAAGAAGGTGATGACGACCCTATGA 1155 0.3758 MSRKFSSLKELNDSKETWRLAVRVVDLWSVINSKGKEHLEMVIIDASGDRIQVLIRSDHTPKWKERIRENMSCIINNGTVYDNDFQWKLCDHDKKFVFIGGTTVKEVDIQNLPPKRFYFKDFSDILAGNCELNRLEDIIGVVQEINNFQYNNFGKKSFVSLSLKEVKGAIVNCTLWESYGTKIFDFYHDEKNKGAIVIVLAHAMIKESQVSNGWSGSKLLINEDIPEITEYLSKLPANEQTEKPSQSSKGMSLWSGASQFTPVESFVHKAKCISLSELCKVKQDMLCVTVGTTQKFFVSKHGWFYYGCTKCSLKASDVNNPYKCSCGQNVEHAIPRYRVDIYVIDGESKFRFVFGDTDCADIIGKSADSIYKAMLEIKKVMTTL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi363g00022 384 Gene3D - 2 106 IPR012340 -
Vivi363g00022 384 PANTHER OS03G0429900 PROTEIN 6 379 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi363g00022 384 Gene3D - 110 246 IPR012340 -
Vivi363g00022 384 SUPERFAMILY Nucleic acid-binding proteins 4 107 IPR012340 -
Vivi363g00022 384 SUPERFAMILY Nucleic acid-binding proteins 282 373 IPR012340 -
Vivi363g00022 384 SUPERFAMILY Nucleic acid-binding proteins 118 241 IPR012340 -
Vivi363g00022 384 Pfam Domain of unknown function DUF223 40 127 IPR003871 -
Vivi363g00022 384 CDD RPA1_DBD_B_like 137 231 - -
Vivi363g00022 384 CDD RPA1_DBD_A_like 19 104 - -
Vivi363g00022 384 Gene3D - 265 382 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi363g00022 4 230 Core DNA Replication Machinery Family AT5G45400 24.686 3.62e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi363g00022 - - vvo:131604714 666.766