Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi363g00006 ATGGCCAAGAAATACAAAGGTCCAGCTATTGGAATTGACCTTGGAACAACCTATTCATGTGTAGCAGTTTGGCAGGGCCAAAACAATCGTGCAGAGATCATTCACAATGATCAAGGAAACACAACTACACCTTCTTTTGTTGCTTTTACGGATTCTCAAAGGTTAATTGGTGATGCTGCTAAAAATCAAGCTGCTTCAAACCCGGCCAACACTATCTTTGATGCAAAGAGGTTAATCGGAAGGAAATATAGTGATTCTGTTATTCAGAATGACATACAGTTGTGGCCATTTAAGGTTGTTGCTGTAAAAGATGACAAACCCGAGATCATTGTTAAGTATAAGGGTAGGGAGAAGGGCTTTTGTGCTGAGGAAATTTCATCAATGGTCCTCACAAAGATGCGTGAGATTGCTGAGAAATTTTTGGGATCAACCGTTGAGAATGCAGTAGTTACCGTGCCTGCTTATTTCAATGATTCTCAGCGAAAAGCAACAAAAGATGCTGGTGTCATTGCTGGCCTCAACGTTATAAGGATAATCAACGAACCTACTGCTGCTGCTCTTGCATATGGCCTTCAGAAGAGAACTAATTGTGTTGAAGAGAGAAATATTTTCATATTTGATCTTGGTGGAGGAACATTTGATGTTTCTGTCCTCACTATTAAGAATAATGTGTTTGATGTCAAGGCCACTGCAGGAGATACTCATCTCGGAGGCGAAGATTTTGATAACAGAATGGTGAATCACTTTCTGATGGAGTTCAAGAGGAAGCATAATAAGGACCTTAGTGCAAACCCTAGGGCTCTTAGGAGGTTGAGAACAGCTTGCGAGAGGGCAAAAAGGACACTTTCATTTGATACCGAGGCCACCGTTGACATAGATGCCTTATATGAGGGTATTGACTTCCAGTCATCCCTCACTCGGGCCAAGTTTGAGCAACTCAATTTTGATCTCTTTGAAAAATGTATGAAGACTGTTGAGAATTGTCTTACTGATTCTAAGATAAACAAGAGTAGTGTGGATGATGTTGTTCTTGTTGGCGGTTCTTCTAGAATTCCCAAAATGCAGCAAATGTTGCAAGACTTTTTCATGTGGAAGGACCTTTGTTTCAGCATCAACCCCGACGAGGCTGTTGCTTATGGTGCAGCTGTTCAAGCTTCTTTGTTGTGTGAAGACATGAAGAGTTCTCTAAACTTAGTTTTGCGAGATGTCACCCCGTTATCTCTAGGTAAGTCAATAAGAGGAGATGCTATGAGTGTGGTGATTCCTAGAAACACTTCCATTCCTGTTAAGAAAACAAAAGAATTCTTTACTGTTGAAGATTACATCTCCTATATGTCGGTTAAGGTTTATGAAGGTGAGAGATTAAAAGCCAGTGAGAACAACCTGTTGGGTAAGTTTAACTTATCAATTCCTCCCGCTCCTCGTGGCCATTTTCCTGTCAAAGTATGTTTTACCATAGATGTTGATGGTATTTTAAACGTAACGGCGAAGGAAGAAACTAGTGGGAATGAGAAAGATATTACAATAACAAGTGAAAAAGGAAGGCTAACAACCCATGAAATTGAAAGAATGATCCAGGAAGCTGAGAATTTTAAGGCTGAAGACATGAAGTTTATGAAGAAAGTTGAAGCAGTCAATGGTTTGGATGATTATCTTTACAACATGAGGAAAGTAATGAAGGATGATAGTGTTACATCAATGCTCAACTCAATTGACAAAATGAAGATCAATTCTGCAATGATAAAAGGGAAACAATTAATTGATGGCAAGCAGGACCAAGAAACATTTGCTTTTGTGGATTTCCAGAGGGAGCTTGAGAACATCTTTGAATCAGCGATGAAAAAGATCAACAAAGGCTACTCTGATGAAGAAAGTGACTATGATTCTTAA 1890 0.3947 MAKKYKGPAIGIDLGTTYSCVAVWQGQNNRAEIIHNDQGNTTTPSFVAFTDSQRLIGDAAKNQAASNPANTIFDAKRLIGRKYSDSVIQNDIQLWPFKVVAVKDDKPEIIVKYKGREKGFCAEEISSMVLTKMREIAEKFLGSTVENAVVTVPAYFNDSQRKATKDAGVIAGLNVIRIINEPTAAALAYGLQKRTNCVEERNIFIFDLGGGTFDVSVLTIKNNVFDVKATAGDTHLGGEDFDNRMVNHFLMEFKRKHNKDLSANPRALRRLRTACERAKRTLSFDTEATVDIDALYEGIDFQSSLTRAKFEQLNFDLFEKCMKTVENCLTDSKINKSSVDDVVLVGGSSRIPKMQQMLQDFFMWKDLCFSINPDEAVAYGAAVQASLLCEDMKSSLNLVLRDVTPLSLGKSIRGDAMSVVIPRNTSIPVKKTKEFFTVEDYISYMSVKVYEGERLKASENNLLGKFNLSIPPAPRGHFPVKVCFTIDVDGILNVTAKEETSGNEKDITITSEKGRLTTHEIERMIQEAENFKAEDMKFMKKVEAVNGLDDYLYNMRKVMKDDSVTSMLNSIDKMKINSAMIKGKQLIDGKQDQETFAFVDFQRELENIFESAMKKINKGYSDEESDYDS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi363g00006 629 FunFam Heat shock 70 kDa 237 320 - -
Vivi363g00006 629 Pfam Hsp70 protein 9 615 IPR013126 GO:0005524|GO:0140662
Vivi363g00006 629 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Vivi363g00006 629 FunFam Heat shock 70 kDa protein 391 545 - -
Vivi363g00006 629 Gene3D - 545 628 IPR029048 -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 211 221 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 339 355 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 477 493 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 148 168 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 371 391 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi363g00006 629 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi363g00006 629 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Vivi363g00006 629 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Vivi363g00006 629 FunFam heat shock 70 kDa protein-like 73 128 - -
Vivi363g00006 629 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi363g00006 629 Gene3D - 194 368 - -
Vivi363g00006 629 Gene3D - 10 385 - -
Vivi363g00006 629 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Vivi363g00006 629 Gene3D - 73 128 - -
Vivi363g00006 629 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 544 IPR029047 -
Vivi363g00006 629 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 619 IPR029048 -
Vivi363g00006 629 Gene3D Actin; Chain A, domain 4 237 320 - -
Vivi363g00006 629 FunFam Heat shock protein 70 10 202 - -
Vivi363g00006 629 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 549 IPR029047 -
Vivi363g00006 629 PANTHER HEAT SHOCK PROTEIN 70KDA 9 576 IPR013126 GO:0005524|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi363g00006 1 619 Calmodulin-binding Proteins AT3G12580 64.090 0.0 815