Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi363g00002 ATGGCCAGAAAATATGAGGGTCATGTAATTGGAATTGACCTGGGTACAACCTACTCACGTGTTGCAGTGTGGCAGGAGCAAAACAACAGAGCTGAGATAATCTACAATGAAGCTTCTTTTGTTGCTTTCACTGATGATAGAAGGTTGATTGGTGATTCTGCCAAAAATCAAGCAGCCTCTAATCCATTCAACACTGTATTTGATGTAAAGAAGTTTATTGGAAGAAAATATAGTGATCCTATAATTCAGAACAATCTACTTTCGTGGCCGTTTGGGGTTCTTTCTCGTAGTAACGACAAACCCATGATTTGTGTTAATTACAAAGGAAAGGAAAAACATTTTTCTCCTGAAGAAATATCGTCTTTGATATTAAAAAAGATGATGGATATTGCAGGGGCATTTTTTAAGTCACCGGTAAAAAATGCAGTGATTACAGTGCCTGCATATTTCGACGATTCTCAGCTAAAAGCCATCAAAGATGCCGCTATCATTGCTGGCCTCAATGTAATGAGGATAATCAATGAACCAACTGCTGCTGCTCTTTCATATGGTCTTCATAAGAGAGCAACTTGTGTTGAAAATAGAAATATTCTCATAGTTGATCTAGGTGGTGGAACTTTTGATGTGTCTCTCGTCACATTCAAGGATGACAAGTTTGAAATAAAGGCGGCGACCATGACTCAATTTGGAGGTGAAGATTTTATTGATAGAATGGTGAACCACTTTGTGAAAGAGTTTAAGATGAAGCACAAAATACATATTAGTAGGTACTCAAGGGCCCTGAGGAGGTTGAGAAATGAGTGTGATGAAGTCAAAAACAAACTTTCGTTTGATTTTGATGCCACGATTTTCTTAGATGCTTTATATGATGGAATTGATTTTTATTCATCAATGTCTCGTGCCAAGTTTGAGCAACTCAACATAGACCTCTTTGATAATTTTATGGATACAGTTAAGACCTGTCTTTCTGATGCGAAGATAAACAATAGCAGTGTTGATGAAGTTGTTCTAGTGGGCGGTTCTTCAAGGATTCCCAAAATTCAGCAGCTATTGCAAAAATTTTTCAAAAAAGGGAAGCATCTCTTGAATATAATCCATCCTGATGAGGCTGTTGCTTGTGGTGCAGCTATTCAAGCTGCTTTGTTAAGTGGAGGCCTTAAGAGTGTTCCAAAGGAAGTGCATCAATATCTTTCAAGGTTGTCTTATGCAGAACAAGAACCAGAGCCAATACCAAAAAATATAGTGAATGATAAAAAGGTGAATGTTACAATTGAAGATAACAAATCTAAGATCATGATTGATTTTCAAGGTGGTGTTGGAATTACAGTTAATGTTCCTGGTTCGCTTAATGTCTCACTTCCTGATACTGCTCTAGTCCTTCCTATCAATGTTTGCTTTGCTACAGATTCTGATGGCATGTTAAATGTTTCTGCCGAGTTGAATGAAAACAAGTTCAGTTCTATATTCATAAAAGTGTGA 1479 0.3719 MARKYEGHVIGIDLGTTYSRVAVWQEQNNRAEIIYNEASFVAFTDDRRLIGDSAKNQAASNPFNTVFDVKKFIGRKYSDPIIQNNLLSWPFGVLSRSNDKPMICVNYKGKEKHFSPEEISSLILKKMMDIAGAFFKSPVKNAVITVPAYFDDSQLKAIKDAAIIAGLNVMRIINEPTAAALSYGLHKRATCVENRNILIVDLGGGTFDVSLVTFKDDKFEIKAATMTQFGGEDFIDRMVNHFVKEFKMKHKIHISRYSRALRRLRNECDEVKNKLSFDFDATIFLDALYDGIDFYSSMSRAKFEQLNIDLFDNFMDTVKTCLSDAKINNSSVDEVVLVGGSSRIPKIQQLLQKFFKKGKHLLNIIHPDEAVACGAAIQAALLSGGLKSVPKEVHQYLSRLSYAEQEPEPIPKNIVNDKKVNVTIEDNKSKIMIDFQGGVGITVNVPGSLNVSLPDTALVLPINVCFATDSDGMLNVSAELNENKFSSIFIKV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi363g00002 492 Coils Coil 254 274 - -
Vivi363g00002 492 ProSitePatterns Heat shock hsp70 proteins family signature 2. 199 212 IPR018181 -
Vivi363g00002 492 ProSitePatterns Heat shock hsp70 proteins family signature 3. 335 349 IPR018181 -
Vivi363g00002 492 Gene3D - 188 362 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 142 162 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 205 215 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 365 385 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 459 475 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 54 62 - -
Vivi363g00002 492 PRINTS 70kDa heat shock protein signature 332 348 - -
Vivi363g00002 492 Gene3D - 67 122 - -
Vivi363g00002 492 SUPERFAMILY Actin-like ATPase domain 194 382 IPR043129 -
Vivi363g00002 492 FunFam Heat shock cognate 71 kDa protein 230 313 - -
Vivi363g00002 492 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi363g00002 492 Gene3D - 10 380 - -
Vivi363g00002 492 PANTHER HEAT SHOCK PROTEIN 70KDA 9 484 IPR013126 GO:0005524|GO:0140662
Vivi363g00002 492 FunFam heat shock 70 kDa protein-like 67 122 - -
Vivi363g00002 492 SUPERFAMILY Actin-like ATPase domain 8 187 IPR043129 -
Vivi363g00002 492 Gene3D Actin; Chain A, domain 4 230 313 - -
Vivi363g00002 492 Pfam Hsp70 protein 9 482 IPR013126 GO:0005524|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi363g00002 1 479 Calmodulin-binding Proteins AT3G12580 54.800 9.60e-172 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi363g00002 K03283 - gmx:102667578 492.656