Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi362g00008 ATGTTGGATGATAATTTTGAAAGCATTGAAGCTCATGAGGTAGTTTTAGATGTACATGATGATGCCTCAAAAATCTCTAAGGAGACGGATATAAAAGACTCTGTGCCCCTTTTGAAGAAGTTGGTAGCAGAAGTGGTTGGAACATACATAATGATATTTACGGGTTGCGCCGCAGTCATTGTGAACCTAAACAATGATCATGTAGTAACACTTCCTGGAATCGCTTTCGCTTGGGGATTTACCGTTATGGTATTGATTTACTCTCTTGGTCATATCTCTGGTGCTCATTTCAATCCTGCGGTTACCATAGCTCATGCTTCAACTAAAATATTTCCCTTCAAACAGGTGCCAGCTTATATTATAGCTCAGGTCATTGGATCAACACTAGCTAGTGGAACTCTAAAGCTTATATTTAATGGCAAAGAAGATCAGTTTATTGGAACACTCGCAGCTGGTTCTAACCTGCAAGCTTTTGTAATCGAGTTCATATGCACTTTTATCCTTATGTTTGTTATTTCTGGAGTAGCCACCGATAACAGAGCGGTTGGTGAGTTAGCAGGGCTTGCAGTTGGGTCTACAATAATAATAGATATATTGTTTGCAGGACCACTTACAGGAGCATCAATGAATCCGGCGAGAACCTTAGGACCTGCAATTGTGTACCATGAATATACAGGACTATGGATATATATGATTTCACCCATTCTAGGAGCTTTGACAGGTACATGGACTTACAATTTCATCAGGCACACCAACAAGCCAATGTGTGATGAGCAGACCAAGATTGAGCTCACAAAGATTGTCCCTTTTCTAAGAAGGAGCAGGTCATAA 831 0.4031 MLDDNFESIEAHEVVLDVHDDASKISKETDIKDSVPLLKKLVAEVVGTYIMIFTGCAAVIVNLNNDHVVTLPGIAFAWGFTVMVLIYSLGHISGAHFNPAVTIAHASTKIFPFKQVPAYIIAQVIGSTLASGTLKLIFNGKEDQFIGTLAAGSNLQAFVIEFICTFILMFVISGVATDNRAVGELAGLAVGSTIIIDILFAGPLTGASMNPARTLGPAIVYHEYTGLWIYMISPILGALTGTWTYNFIRHTNKPMCDEQTKIELTKIVPFLRRSRS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 Gene3D Glycerol uptake facilitator protein. 3 263 IPR023271 -
Vivi362g00008 276 PANTHER AQUAPORIN NIP2-1 29 258 IPR034294 -
Vivi362g00008 276 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Vivi362g00008 276 Pfam Major intrinsic protein 34 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 NCBIfam MIP family channel protein 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00008 276 SUPERFAMILY Aquaporin-like 35 256 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi362g00008 7 272 Major Intrinsic Protein MIP AT5G37820 52.574 2.37e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi362g00008 K09874 - gmx:100812577 382.874