Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi362g00007 ATGGCTGATCATTCATCAAGCAATGGAAACCATGAAATTGCTATGAATGTAAATGGTGATTCCTCCAAAAATTTTGAAGATAACTCAGAATATAAAGACTATGTGCCACTTTTGCAAAAGTTGGTGGCAGAATTGGTGGGGACATACTTCTTGATATTTGCAGGATGTGCTGCAGTTGTTGTAAACCTTGACAATGACAAAGTGGTAACACATCCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCGCTCGGTCACATCTCTGGTGCTCATTTTAATCCTGCGGTCACCATCGCTCACGCGTCAACTAAAAGATTTCCCCTTAAAGAGGTGCCAGCTTATTTGATAGCACAAGTTCTTGGATCCACTCTTGCAAGTGGAACACTTAGACTTATATTCAATGGGGATAAGAATCATTTCCCCGGAACACTTCCGGCTGGTTCGGATCTTCAGGCATTTGTGGTTGAATTCATAATCACTTTTTATCTTATGTTCATCATCTCTGGAGTTGCCACGGATAATAGAGCGATCGGTGAATTGGCTGGACTTGCAGTTGGATCTACGGTACTTCTAAATGTCATGTTTGCCGGGCCAATTACGGGAGCTTCAATGAACCCTGCAAGAAGTTTAGGGCCTGCTATTGTTCATAAGGAATATAGAGGAATATGGATATATTTAGTCGCAACGACTCTAGGTGCCGTGGCCGGTACATGGGCATATACTTTCATCCGGTACACGAACAAGCCGGTGCGCGAAATTAGTAAGAGTGCATCTTTTCTTAAAGGGGTACAAAATGGGGAAGCAAGGTGA 825 0.4279 MADHSSSNGNHEIAMNVNGDSSKNFEDNSEYKDYVPLLQKLVAELVGTYFLIFAGCAAVVVNLDNDKVVTHPGISIVWGLTVMVLVYSLGHISGAHFNPAVTIAHASTKRFPLKEVPAYLIAQVLGSTLASGTLRLIFNGDKNHFPGTLPAGSDLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHKEYRGIWIYLVATTLGAVAGTWAYTFIRYTNKPVREISKSASFLKGVQNGEAR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi362g00007 274 MobiDBLite consensus disorder prediction 1 21 - -
Vivi362g00007 274 NCBIfam MIP family channel protein 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 SUPERFAMILY Aquaporin-like 35 258 IPR023271 -
Vivi362g00007 274 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 Gene3D Glycerol uptake facilitator protein. 2 261 IPR023271 -
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00007 274 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Vivi362g00007 274 PANTHER AQUAPORIN NIP2-1 18 264 IPR034294 -
Vivi362g00007 274 Pfam Major intrinsic protein 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi362g00007 1 272 Major Intrinsic Protein MIP AT5G37820 54.348 1.73e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi362g00007 K09874 - gmx:100786924 457.603