Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi362g00006 ATGGCTGATCATTCATCAAGCAATGGAAACCATGAAATTGCTATGAATGTAAATGGTGATTCCTCCAAAAATTTTGAAGATAACTCAGAATATAAAGACTATGTGCCACTTTTGCAAAAGTTGGTGGCAGAATTGGTGGGGACATACTTCTTGATATTTGCAGGATGTGCTGCAGTTGTTGTAAACCTTGACAATGACAAAGTGGTAACACATCCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCGCTCGGTCACATCTCTGGTGCTCATTTTAATCCTGCGGTCACCATCGCTCACGCGTCAACTAAAAGATTTCCCCTTAAAGAGGTGCCAGCTTATTTGATAGCACAAGTTCTTGGATCCACTCTTGCAAGTGGAACACTTAGACTTATATTCAATGGGGATAAGAATCATTTCCCCGGAACACTTCCGGCTGGTTCGGATCTTCAGGCATTTGTGGTTGAATTCATAATCACTTTTTATCTTATGTTCATCATCTCTGGAGTTGCCACGGATAATAGAGCGATCGGTGAATTGGCTGGACTTGCAGTTGGATCTACGGTACTTCTAAATGTCATGTTTGCCGGGTTCAGAAGAGTAGTTGCTTGA 627 0.4179 MADHSSSNGNHEIAMNVNGDSSKNFEDNSEYKDYVPLLQKLVAELVGTYFLIFAGCAAVVVNLDNDKVVTHPGISIVWGLTVMVLVYSLGHISGAHFNPAVTIAHASTKRFPLKEVPAYLIAQVLGSTLASGTLRLIFNGDKNHFPGTLPAGSDLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVLLNVMFAGFRRVVA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi362g00006 208 MobiDBLite consensus disorder prediction 1 21 - -
Vivi362g00006 208 Gene3D Glycerol uptake facilitator protein. 2 204 IPR023271 -
Vivi362g00006 208 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00006 208 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00006 208 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00006 208 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00006 208 Pfam Major intrinsic protein 36 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi362g00006 208 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Vivi362g00006 208 PANTHER AQUAPORIN NIP2-1 18 202 IPR034294 -
Vivi362g00006 208 SUPERFAMILY Aquaporin-like 35 203 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi362g00006 26 202 Major Intrinsic Protein MIP AT4G18910 73.370 1.03e-91 266