Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi361g00006 ATGGGAGAGGTAGCGCGTGGAGGTTGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGATTCAGCTCATCATTCCCATCGAATCCGCTCACTGCACTGTCTCCTACCTCGGTGACCTTGGCCTTCTTCAGTTTAAAGATCTCAATTCAGAGAAGAGCCCGTTTCAACGAACTTATGCAACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAGTTGCGTTTCTTCAAGGAGCAAATGTTTAAGGCAGGTGTTTCACCAAAAGGTTCCACAGCACAGGTTGATGTGAACATCGATGACCTTGAGATAAAACTTTCAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACATACAATGAACTTGTTGAGTATAAGCTTGTTCTTCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCATAGAGCAGCAAAGAGAATATGAATCACGCCAACTGAGTGGGGATTCTATGGAAGTACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGGCAGTTAAGTTGGGATTTTTAGCTGGTCTCGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGAGGCAATGTATTTTTGAGGCAGACTGCTGTTGAGGATCCGGTTACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTCGTCTTTTACGCTGGTGAAAAAGTGAAAGCCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCCAATCGATACCCGTTTGCTGAGGAGCTTGGAAAACAAGCTCAGATGATTACGGAGGTTTCTGGAAGGCTTACAGAATTGAAGACCACCATAGATGCTGGACTTTCGCACCGAGTTAACTTGCTGGAAAATCTTGGGACTCAATTCGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCCATCCACCATACCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTAGTAGCTGAGGGGTGGAGTCCCGTTTTTGCAACAAATCAGGTCCAGGATGCATTACAGCGGGCTTCAAAGGACTCTAACTCCCAAGTCAGTGCTATTTTGCAAGTTTTGCATACCAGAGAGTTGCCACCTACCTACTTTCGCACGAACAAATTTACGTCTTCGTATCAAGGAATTATAGACTCATATGGGGTTGCTAAATACCAAGAAGCAAATCCTACTGTGTTTACTGTAGTTACCTTTCCATTTCTTTTCGCTGTAATGTTCGGTGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGATATGACTTTTGGAGGTCGCTATGTTATTTTCATGATGTCACTCTTCTCGATCTACACTGGCCTGATCTATAACGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGCCCCTCTGCATATGTGTGCCGTGACCTTTCTTGCAGGGATTCTACCACAATAGGGCTGATAAAAGCGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACTCTTTGAAAATGAAAATGTCAATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTTTAATGAGCTATGCCAATGCCAGGTTCTTTAAGAACCATGTAAATGTATGGTTCCAATTTATCCCCCAGGTGATATTTCTTAACAGTCTATTTGGCTATCTATCCCTCCTTATCATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCTTGAGTCCAATGGATGATTTGGGCGAGAACCAACTCTTCGAGGGTCAGAAAAATCTTCAGCTCGTGCTTCTGCTTCTGGCTTTTGTCGCCGTGCCCTGGATGCTGTTGCCAAAACCCTTTATTTTGAAGAAACAACATGAAGCTAGGCACGAAGAAGAATCCTATGCACCACTTTCAAACACAGAGGAAAGCTTGCAAGTGGAATCAAATCATGATTCCCACGGTCATGCGGAATTCGAGTTCAGTGAAATTTTTGTACATCAACTCATACACACTATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAATTATCAAGTGTGTTCTACGAGAAGGTTCTGCTTATGGCATGGGGGTACAATAATTGGCTTATCCTGATAGTGGGTCTCATTGTTTTCATTTTCGCAACCGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCACGCATTGAGGCTTCACTGGGTGGAGTACCAAAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCTCCCTTTCTCGTTCACATTGCTAGACGAAGAGGATGAGTTGATATAA 2466 0.4307 MGEVARGGCCPPMDLFRSEPMQLIQLIIPIESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYATQIKRCGEMARKLRFFKEQMFKAGVSPKGSTAQVDVNIDDLEIKLSEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRQLSGDSMEVPLLQDQELPGDSSKAVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQTAVEDPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFGANRYPFAEELGKQAQMITEVSGRLTELKTTIDAGLSHRVNLLENLGTQFEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATNQVQDALQRASKDSNSQVSAILQVLHTRELPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITDMTFGGRYVIFMMSLFSIYTGLIYNEFFSVPFELFGPSAYVCRDLSCRDSTTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGILMSYANARFFKNHVNVWFQFIPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPMDDLGENQLFEGQKNLQLVLLLLAFVAVPWMLLPKPFILKKQHEARHEEESYAPLSNTEESLQVESNHDSHGHAEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNWLILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYKFLPFSFTLLDEEDELI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi361g00006 821 Coils Coil 94 128 - -
Vivi361g00006 821 PANTHER VACUOLAR PROTON ATPASES 15 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi361g00006 821 PIRSF ATP6V0A1 11 820 IPR026028 GO:0000220|GO:0046961
Vivi361g00006 821 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi361g00006 13 819 Primary Pumps ATPases(2) AT2G21410 77.723 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi361g00006 K02154 - gmx:100810062 1423.68