Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi357g00006 ATGACTCTCAGTCATAACTTGACGCCAAAGATAAAGGTTGCAGGAGGTTTTGACTTGATAGATACTTTTCAGGATATGTTTGGGGCTGGAGGTGACACATCATCAAGCACCATAGATAGGGCAATGGCAGAAATGACAAGGGATCCAAGAATAATGAATAAAACACAAGATGAGGTGAGAGAGGTTTTCAAAATTAAAGGAAGGGTTGGTGAAAATTACATCGACAAATTAAATTATTTGAAATCAGTTGTCAAAGAAACCCTGAGTTTACACCCTCTAGTACCACTTTTTCTACCAAGAGAAAATGGTCAAGCATGTGAGATAAAAGGCTTTCACATACTGATTAAGACTAAGGTGATAATCAATGCTTGGGCTATTGCAAGAGATCCAAACGATTGGACTGAACCAGAGAGGTTTTATCCTGAGAGATTCATTGACAGCAATATTGACTATAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTTCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGAGAAATATTGACCTTACGCTTGTAGTGTTGTTATATCATTTTGACTAG 573 0.377 MTLSHNLTPKIKVAGGFDLIDTFQDMFGAGGDTSSSTIDRAMAEMTRDPRIMNKTQDEVREVFKIKGRVGENYIDKLNYLKSVVKETLSLHPLVPLFLPRENGQACEIKGFHILIKTKVIINAWAIARDPNDWTEPERFYPERFIDSNIDYKGSNFEYIPFGSGRRICPGSTFGLRNIDLTLVVLLYHFD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi357g00006 190 PANTHER OS08G0105600 PROTEIN 24 190 - -
Vivi357g00006 190 Gene3D Cytochrome P450 13 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 168 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Vivi357g00006 190 Pfam Cytochrome P450 21 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi357g00006 190 SUPERFAMILY Cytochrome P450 18 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi357g00006 23 190 Cytochrome P450 AT3G26230 54.118 2.10e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi357g00006 - - vvo:131629927 390.963