Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi357g00002 ATGAGGCTTCTTATATCAGCTCTATGTGTCACTGTACTATGTTCTTATGCAGCGGCATATGATCCTTTGGATCCTGACGGAAACATAACGATCAAATGGGATGTTGTCTCGTGGACACCGGATGGCTATGTGGCGGTGGTAACGATGAGCAATTTCCAAATGTACCGACACATAATGAATCCGGGATGGACATTAGGATGGTCATGGGCTAAGAAAGAAGTGATATGGTCAATGGTAGGATCTCAAACAACTGAGCAAGGAGATTGTTCAAAATTCAAAGGAAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAACCTACAATTCTCAAACTGTTGTAAGGGTGGAGTTGTAGCAGCATGGGGACAAGACCCTTCATCAGCTGTTTCATCTTTTCAAATCAGTGTTGGACAAGGTGGTACTTCAAACAAGACAGTTAAACTTCCTAAGAACTTCACTCTCTCGGCTCCCGGACCTGGCTATACGTGCGGTCCGGCTAAGATTGTTCCGTCCACCACTTTTCTTACCTCGGATAAGCGCCGCAAAACTCAAGCACTTATGACATGGAATGTGACATGTACATATTCACAATTTCTTGCAAGAAAAAACCCAAGTTGCTGTGTTTCTTTGTCATCTTTCTATAATGAGACTATTACTCCTTGTCCTTCTTGTGCTTGTGGATGCCAGAACAAGAAGAATTGTGTCAAGGGTCATTCTAAATTCCTAGACATGGTAGGGTTACATACACCAAAGAGAGACAATGAACCATTGCTACAATGCACTCATCATATGTGTCCTATAAGGGTACACTGGCATGTGAAAGTTAACTATAAGGACTATTGGAGAGTCAAGATAGCTGTGACAAATTTCAATTATAGATTGAATTATTCTCTTTGGACTCTTGCTGTACAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTCCCTATCAATCCATAAATGACACAGGTATGTTCTATGGCATGAAATTCTTCAATGATCTCTTGATGGAAGCTGGACCAAGTGGAAATGTTCAATCAGAAGTGCTTCTTCAAAAGAACAAGGAAACATTCACTTTCAACCAAGGATGGGCGTTTCCTAGGAGAGTCTACTTCAATGGTGAAGAGTGCATGATGCCACCACCAGATACCTACCCTTACCTCCCTAATTCTTCCCCTATGAATGCCCTCAACTTCCAAGCACTCATCACCTCATTCCTTCTCTTGCTAGCTCTTTGGTGTATAGGTACATAA 1308 0.4197 MRLLISALCVTVLCSYAAAYDPLDPDGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNLQFSNCCKGGVVAAWGQDPSSAVSSFQISVGQGGTSNKTVKLPKNFTLSAPGPGYTCGPAKIVPSTTFLTSDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKGHSKFLDMVGLHTPKRDNEPLLQCTHHMCPIRVHWHVKVNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKFFNDLLMEAGPSGNVQSEVLLQKNKETFTFNQGWAFPRRVYFNGEECMMPPPDTYPYLPNSSPMNALNFQALITSFLLLLALWCIGT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi357g00002 435 PIRSF COBRA 1 434 IPR006918 GO:0010215|GO:0016020
Vivi357g00002 435 PANTHER PROTEIN COBRA 8 424 IPR006918 GO:0010215|GO:0016020
Vivi357g00002 435 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi357g00002 19 430 COBRA Gene Family AT3G29810 68.523 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi357g00002 - - gmx:100783410 831.247