Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi356g00060 ATGGAGAGTTCTTTACTCTTCTTCTTTCTCTCCTTCACAACTTCACTCGTTCTCCTTCTCCCTTTTACATCTTCTCAGATCATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGGACAGAAAGTTTCACCGATGAAATAGGTCTTGATTGGACTCCTGATAATAAGCTTACATATGGAGAAATAGCCACTATATCTGTTGCGAACGAGACACGAAAGCAATACTCGACGTTACGGTATTTTCCTGCTGATTCTAGGAAATATTGTTACACACTTGATGTTATTAGTAGGACGAGGTATTTGTTAAGGGCGACTTTCTTGTATGGGAACTTTGACAAGAACAATGTTTATCCTAAGTTTGATATTTCTGTTGGAGCTACTCATTGGTCTACTATTGTTATATCGGATGCTGATAGTATAGAAATGAGAGAGCTTATATTTTTGGCTTCGAGTTCAACTGTGAGTGTGTGTTTGTCTAATGCGACAACTGGACAGCCGTTTCTGTCTACGCTTGAGCTTCGACAATTCAACGGTTCGGTTTATTTTACGGAATTTGAGAAACAGTTTTACCTGAGTGTCTCTGCAAGGATCAATTTTGGTGCGGAGAGTGATGCTCCAATCAGGTACCCTGATGATCCTTTTGATAGAATTTGGATGTCGGATTCTGTTAAGAAAGCAAATTATCTTGTTGATGTCGCTGCTGGAACTGAGAAAATTTCTACCAATGAACCAATTTTTGTTAACCGAGATGATATACCACCGATGAAAGTGATGCAGACAGCGGTAGTAGGTACAAATGGATCTTTAACTTACCGGTTGAATTTGGATGGTTTTCCTGGCACTGCTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGCGTCCAACTGAGTCTAGAAAATTCAGGCTGATGCTTCCAGGCCAGCCTGAAATTAGCAAGATCATTGTGAATATTGCCGAAAATGCTCTTGGGAAATATCGCCTTTATGAACCGGGATTTGTCAATCTAACCCTACCTTTTGTGCTTTCCTTTAAATTCGGCAAGACAGCTGATTCGTCCAAGGGGCCTCTCCTTAATGCCATGGAGATAAATAAGTATCTTGAGAAAAATAATGGTTCACCGGATGTTGAAGCTATTTCGGGAGTGCTTTCTCGCTATTCTTCAGCAAACTGGACTCAAGAAGGAGGTGATCCATGTCTTCCTGTTTCCTGGTCATGGATCCACTGTAGCTCGGATCCACAACCAAGAATAATTTCAATCTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAATTGGTTGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGCCCAATACCCGATTTTACTGGTTGCACGGACTTAAAGATCATCCATCTTGAAAATAATCAGTTCACCGGTGAGCTCCCAGCCTCCTTGGTGAATCTTCCGAGTTTGAGGGAACTATATGTTCAAAATAATATGCTATCTGGAGCAGTACCGCCAGAGCTTCTAAGCAAGAATTTGGTTTTAAATTACTCCGGAAACATTAACCTACATAAAGGAAGCAAAACAAAGAGCCACATATATATTATTATTGGTTCAGCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGGTTATGCGTAAAGGCAAGAAAAAATATTATGAGAAAGACCACATAGTTTCTGTCCCTTCTTGGAAGAGTGATGATCCTGCAGAATCGGCTCACTGCTTCAGCTTAGCTGAAATTGAAAGTGCTACAAACAACTTTGAGAAAAGAATCGGTTCTGGTGGTTTTGGAATTGTATATTATGGAAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTTAGGAATAATTCCTATCAAGGCAAGCGTGAGTTCTCCAATGAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGTCGAGAAGAAGATAATAGTATTCTCGTGTACGAGTTCATGCATAATGGCACACTCAAGGAACATCTCTATGGCCCTTTAGTGCACGGACAAAGTATAAGTTGGATTAAACGCCTTGAGATTGCAGAAGACTCTGCCAAAGGAATTGAATACCTTCATACAGGTTGTGTTCCTGTAGTTATTCATAGAGACTTGAAAAGTAGCAATATTCTTCTTGACACACACATGAGAGCCAAGGTTTCAGATTTCGGTCTTTCCAAACTCGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGCGGAACAGTAGGATACCTGGATCCTGAGTACTATATTTCCCAACAACTAACTGACAAGAGCGATGTGTATAGCTTTGGTGTAATTCTTCTAGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGTTTCGGGATTCATTGCCGAAACATAGTCCAATGGGCAAAATTGCACATTGAGAGTGGGGATATACAAGGCATCATTGATCCCTTACTAGGAAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGAGATATGCGTCCATCGATCTCGGAAGTTTTAAAGGAGATCCAAGATGCAATATCTATTGAGAGAGAAGCTGAAACATCGCGAGAATGCAATTCTGATGAGGTTTCAAAAAATTCTTTTCATTCTTCCATGAACATAGGTTCAATGGATCTCGGTAGAGTTGAGAGTTTCCTTTCAATCGATGAATCGATTGCGCAACCTACTGCAAGATAG 2775 0.4011 MESSLLFFFLSFTTSLVLLLPFTSSQIMQGFVSLDCGGTESFTDEIGLDWTPDNKLTYGEIATISVANETRKQYSTLRYFPADSRKYCYTLDVISRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDADSIEMRELIFLASSSTVSVCLSNATTGQPFLSTLELRQFNGSVYFTEFEKQFYLSVSARINFGAESDAPIRYPDDPFDRIWMSDSVKKANYLVDVAAGTEKISTNEPIFVNRDDIPPMKVMQTAVVGTNGSLTYRLNLDGFPGTAWAVTYFAEIEDLRPTESRKFRLMLPGQPEISKIIVNIAENALGKYRLYEPGFVNLTLPFVLSFKFGKTADSSKGPLLNAMEINKYLEKNNGSPDVEAISGVLSRYSSANWTQEGGDPCLPVSWSWIHCSSDPQPRIISILLSSKNLTGNIPSDITKLVGLVELWLDGNMLTGPIPDFTGCTDLKIIHLENNQFTGELPASLVNLPSLRELYVQNNMLSGAVPPELLSKNLVLNYSGNINLHKGSKTKSHIYIIIGSAVGASVLLLATVISCLVMRKGKKKYYEKDHIVSVPSWKSDDPAESAHCFSLAEIESATNNFEKRIGSGGFGIVYYGKLKEGKEIAVKVLRNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDNSILVYEFMHNGTLKEHLYGPLVHGQSISWIKRLEIAEDSAKGIEYLHTGCVPVVIHRDLKSSNILLDTHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGIHCRNIVQWAKLHIESGDIQGIIDPLLGNNYDLQSMWKIAEKALMCVQPHGDMRPSISEVLKEIQDAISIEREAETSRECNSDEVSKNSFHSSMNIGSMDLGRVESFLSIDESIAQPTAR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi356g00060 924 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Vivi356g00060 924 Gene3D Phosphorylase Kinase; domain 1 573 671 - -
Vivi356g00060 924 Gene3D Ribonuclease Inhibitor 377 530 IPR032675 -
Vivi356g00060 924 CDD STKc_IRAK 602 869 - -
Vivi356g00060 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Vivi356g00060 924 Gene3D Transferase(Phosphotransferase) domain 1 672 896 - -
Vivi356g00060 924 Pfam Malectin-like domain 34 364 IPR024788 -
Vivi356g00060 924 PANTHER OS07G0107800 PROTEIN-RELATED 461 872 - -
Vivi356g00060 924 FunFam Leucine-rich repeat protein kinase family protein 376 528 - -
Vivi356g00060 924 SMART serkin_6 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi356g00060 924 Pfam Protein tyrosine and serine/threonine kinase 598 798 IPR001245 GO:0004672|GO:0006468
Vivi356g00060 924 FunFam Leucine-rich repeat receptor-like protein kinase 574 671 - -
Vivi356g00060 924 ProSiteProfiles Protein kinase domain profile. 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi356g00060 924 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 672 881 - -
Vivi356g00060 924 SUPERFAMILY L domain-like 401 518 - -
Vivi356g00060 924 Gene3D - 191 367 - -
Vivi356g00060 924 SUPERFAMILY Protein kinase-like (PK-like) 581 869 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi356g00060 22 706 Receptor kinase-like Gene Family AT2G37050 67.765 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi356g00060 Malectin_like 1.2e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi356g00060 - - vvo:131610279 1788.08