Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi356g00053 ATGATGGATATTGAGGAAGTAGAAAGAGTAGTGGTTGCCAAACCAGTTGCTTCAAGGCCAAATTGTTCTACTTTCAAATCTTTCTCGGAGCTTCTAGCAGGTGCTATCAATGCCAATCCTCCAATTGCATCTTCTTCTCAAACTACAACTTCTGCAATTAGACCAAAGACAGTCAGGTTCAAGCCACCATTGAATCTCCCCCCTTCTCAGGCTGACATTTTTAGAGGTGAACTTAGCAATTCTTCTGACATGGATCCTAAGCCTGACACCAATCAGTCTCTCATTTACAAGCCAATGGCAAAATTCGTGTCACAGACAACTGTCTCTCTCTTGGCAAACATGGGAATTTGTAGTACTAGTCAGCCACAACCACAGCAATCAATGGAGACCAATCTTCAGAGTCTTAACCATGACAAATTTAGATCTAACAAAACCTCAAATTTTCATCAGAACATTACTACTACCCTACCTACAGAAACATACCAGGCCACTGAACCTTGTAAGACGCCTGCGCAACAGAACATGGAGGAAGACCAGAAAGCTTTAACATCATCCACAGTGAATGCGGATAGACCTTCATATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAATGCACACATCCTAATTGTCCAGTTAAGAAGAAAGTTGAAAGATCATTTGATGGCGAGATTGCTGAAATTGTTTACAAAGGCGAACACAATCATGGAAAACCGCAACTTCTAAAGCGCAACGCGGGAGCGACACAAGGATCAGGAATGGTTTCTGACGGAATGGTTCAAGATACATTATGGAGTAATAATAGTAATCAGAATGAAGGAAGAATAGAGAATCATGTCAAAGCTTCACAGACTAATGATTCTGTTCTAGAAAATTCATGCGGTTTAAGCGGGGATTGTGAGGAAGGAAGCAAAGGATTCGAGGCAGACGAAGATGACCCTAGAAGTAAAAGAAGGAAAAACGAGAACCAATCAAGCGAAGCGGCAGCATCAGAAGAAGGTTTAGTAGAGCCACAGACCGTGATGCAAAACTCAGTGGATTCTGATATCCTTGGAGACGGCTTTCGCTGGAGAAAATATGGACAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGGTGTACTCATATAAAGTGCAACGTTCGCAAGCACGTGGAGAGAGCAATAGATGATCCAAAATCATTTGTGACTACGTATGAAGGAAAGCACAACCATGAGATACCGCTCAAGAACACATCAACTGTAGCATCATCTGAAAAGGATTCTCTTAGTAAAGATAAACCATATTGA 1338 0.4141 MMDIEEVERVVVAKPVASRPNCSTFKSFSELLAGAINANPPIASSSQTTTSAIRPKTVRFKPPLNLPPSQADIFRGELSNSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTSQPQPQQSMETNLQSLNHDKFRSNKTSNFHQNITTTLPTETYQATEPCKTPAQQNMEEDQKALTSSTVNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHNHGKPQLLKRNAGATQGSGMVSDGMVQDTLWSNNSNQNEGRIENHVKASQTNDSVLENSCGLSGDCEEGSKGFEADEDDPRSKRRKNENQSSEAAASEEGLVEPQTVMQNSVDSDILGDGFRWRKYGQKVVKGNPYPRSYYRCTHIKCNVRKHVERAIDDPKSFVTTYEGKHNHEIPLKNTSTVASSEKDSLSKDKPY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi356g00053 445 SUPERFAMILY WRKY DNA-binding domain 358 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 ProSiteProfiles WRKY domain profile. 195 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 MobiDBLite consensus disorder prediction 306 358 - -
Vivi356g00053 445 MobiDBLite consensus disorder prediction 258 285 - -
Vivi356g00053 445 Pfam WRKY DNA -binding domain 366 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 SUPERFAMILY WRKY DNA-binding domain 191 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 430 IPR044810 GO:0003700
Vivi356g00053 445 FunFam WRKY transcription factor 57 350 424 - -
Vivi356g00053 445 MobiDBLite consensus disorder prediction 250 285 - -
Vivi356g00053 445 Gene3D WRKY domain 177 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 Gene3D WRKY domain 350 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 MobiDBLite consensus disorder prediction 423 445 - -
Vivi356g00053 445 MobiDBLite consensus disorder prediction 321 339 - -
Vivi356g00053 445 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi356g00053 445 FunFam WRKY transcription factor 178 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi356g00053 85 425 WRKY Transcription Factor Family AT2G37260 46.849 3.70e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi356g00053 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi356g00053 - - gmx:100794069 636.721