Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi356g00040 ATGATTATTGATTCACCCATGCATGCAGTGTCTTCCTTAAACCCCACGCCTCCTAAACCAGTCTCCCACCACGACATGCTTCCTTTCTTCAACCAATCTATGGAACTCGTTCCCAGTCCCCTCAAAACACGACGAACCCTTCACTCTCCTACACTCGGTGAACTCCTTAAACGCGTTGAAGATGCTCAAAACGACAACAATAATGCTCAACCACACCATGTTCTCGACCTTTCTTCACCCTCTTCTTCCACCACTCTCCCCCCACCTTTTTTTCTTTCTTTCACTGACTTGACTTACAGCGTCAAGCTAGACAGAAAGTTGACATGCTTTTCTTTCAATCAAAATTCTCTTCCAACGGATCATGAAACCGATACCAAACCAAATGGAACCAAGATTCTCCTCAACAACATCTCCGGTGAAGCAAGAGACGGAGAAATCATGGCAGTTCTCGGCGCAAGCGGCTCTGGAAAATCAACTCTCATCGACGCTCTCGCTGACAGAATTTCCAAAGAGTCTCTCAAAGGTACTATAACTCTAAACGGAGACGTTCTGGAGTCAAGTCTCCAGAAAGTAATTTCAGCTTATGTCATGCAAGATGATCTTCTCTTCCCCATGCTCACCGTGGAAGAAACTCTTATGTTCTCTGCGGAGTTTAGACTCCCTCGCTCTCTCTCCAAATCAAAGAAAAAAGCTCGTGTCCAAGCTCTCATCGATCAGCTCGGTCTCCGCAACGCTGCCTCAACAGTCATAGGAGACGAAGGCCACCGCGGTGTCTCAGGTGGAGAACGCCGCCGTGTCTCGATCGGCACAGACATCATCCACGATCCAATCATTTTATTCTTAGACGAACCAACATCCGGACTTGACTCCACCAGCGCATACATGGTGGTTAAGGTCTTACAGCGAATTGCTCAAAGCGGGAGTATCGTCATGATGTCAGTTCATCAACCAAGCTACAGAATCCTCGGATTGTTAGACCGTTTGATCTTCCTCTCTCACGGCCAAACCGTCTACAGCGGTTCTCCGGCGAGCCTCCCTAGTTTTTTCTCCGAGTTCGGTCATCCTATACCGGAGAACGAGAACCGTACCGAATTTGCACTGGACCTAATCCGCGAGCTTGAAGAAACTCCGGGAGGAACCAAAGGTCTTGTGGAGTTCAACAAAACATGGCAGTTGAAAAATCAACCACTCTCGGCAAACGTCGGAGCCAAACTGTTGTTAAAGGACGCCATCAGTGCGAGTATCTCAAGGGGAAAATTAGTCTCAGGAACTAACGGTGGAAACGAAAACGGAAACTCAACCGCTTCAGTTGCCACGTTTGCAAATCCATTTTGGATTGAAATGGCGGTTATTGGAAAACGTTCTCTAACAAACTCCCGTCGGATGCCGGAATTATTCGGAATCCGATTAGGTGCAGTTCTGGTCACCGGAGGAATATTAGCCACTATCTTCTACCATCTTGACAACTCACCAAAAGGTGTTCAAGAGCGTTTAGGTTTCTTTGCCTTCGCCATGTCAACAACCTTCTACACTTGCGCAGAAGCCATTCCCGTTTTCCTCCAAGAGCGTTATATTTTCATGAGAGAAACAGCCTACAACGCTTACCGTCGTTCCTCTTACGTCCTCGCTCACTCCATCATCTCCCTCCCTGCACTCGTCTTCCTCTCCTTCACTTTCGCCATAACTACCTTCTGGTCGGTCGGACTCGCCGGCGGGACATCTGGTTTCTTGTTCTACTTTTTAACCATTTTAGCTTCTTTCTGGGCAGGGAGTTCCTTCGTGACGTTCCTCTCCGGCGTAGTTTCTCATGTGATGCTTGGTTTTACCGTCGTGGTTGCCATAATGGCCTACTTTCTTCTCTTCAGCGGATTCTTCATCAGCAGAGACAGAATTCCACCTTACTGGATATGGTTCCATTACCTGTCACTAGTGAAGTACCCTTATGAAGGAGTGCTTCAGAATGAGTTTGCTATTAACCCACCAAGATGCTTTGTGAGAGGGATTCAGATGTTCGATAACACGCCGCTCGGCGATGTTCCAGGGAGTTTGAAGGTGGAGCTGTTGAAGAGCATGAGCAGGACGCTTGGGATTACCATAACGAGCGACACTTGTGTTGTTACAGGAGAAGATGTACTGAAGCAGCAGGGGATCACGCAGCTAAGTAAATGGAATTGCTTGTACATTACCATTGCTTGGGGTTTCTTCTTTCGCTTCCTCTTTTACTTGGCGTTGCTTTTTGGAAGCAAGAACAAAAGGAAATAA 2262 0.4735 MIIDSPMHAVSSLNPTPPKPVSHHDMLPFFNQSMELVPSPLKTRRTLHSPTLGELLKRVEDAQNDNNNAQPHHVLDLSSPSSSTTLPPPFFLSFTDLTYSVKLDRKLTCFSFNQNSLPTDHETDTKPNGTKILLNNISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGTITLNGDVLESSLQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVMMSVHQPSYRILGLLDRLIFLSHGQTVYSGSPASLPSFFSEFGHPIPENENRTEFALDLIRELEETPGGTKGLVEFNKTWQLKNQPLSANVGAKLLLKDAISASISRGKLVSGTNGGNENGNSTASVATFANPFWIEMAVIGKRSLTNSRRMPELFGIRLGAVLVTGGILATIFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALVFLSFTFAITTFWSVGLAGGTSGFLFYFLTILASFWAGSSFVTFLSGVVSHVMLGFTVVVAIMAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFAINPPRCFVRGIQMFDNTPLGDVPGSLKVELLKSMSRTLGITITSDTCVVTGEDVLKQQGITQLSKWNCLYITIAWGFFFRFLFYLALLFGSKNKRK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi356g00040 753 FunFam ABC transporter G family member 6 123 349 - -
Vivi356g00040 753 Pfam ABC-2 type transporter 450 656 IPR013525 GO:0016020|GO:0140359
Vivi356g00040 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 65 741 - -
Vivi356g00040 753 Gene3D - 123 349 IPR027417 -
Vivi356g00040 753 Pfam ABC-2 type transporter 315 395 IPR043926 GO:0140359
Vivi356g00040 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 350 IPR027417 -
Vivi356g00040 753 ProSitePatterns ABC transporters family signature. 258 272 IPR017871 GO:0005524|GO:0016887
Vivi356g00040 753 Pfam ABC transporter 134 286 IPR003439 GO:0005524
Vivi356g00040 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 358 IPR003439 GO:0005524
Vivi356g00040 753 MobiDBLite consensus disorder prediction 64 83 - -
Vivi356g00040 753 SMART AAA_5 143 358 IPR003593 GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi356g00040 133 318 Calmodulin-binding Proteins AT2G36910 28.571 3.46e-10 62.0