Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi354g00047 ATGCAGGGTGAATTAGAGTTACCACCTGGTTTCAGATTTCATCCAACAGATGAAGAATTGGTGAATCATTACTTGTGTAGAAAATGTGCTGGCCACTCAATTTCTGTTTCCGTTGTTAAAGAAGTTGATTTGTATAAATTTGATCCATGGCAGCTACCTGAAATGGGTTATCAAAGTGAGAAAGAATGGTACTTTTTCTCTCCGAGGGATCGAAAATACCCGAACGGTTCTCGGCCTAATCGGGCTGCTGGAAGTGGTTACTGGAAGGCTACCGGGGCTGATAAACCGATTGGGAAAGTGAAGCCAATGGGGATAAAAAAGGCACTGGTTTTTTATGCTGGTAAAGCTCCCAAAGGAGTGAAAACTAATTGGATTATGCATGAGTATCGTCTTGCCAACGTTGATAGGTCTGCCGGCAAGAAAAACAATTTGAGGCTTGATGATTGGGTGTTGTGTAGAATTTACAACAAGAAAGGAAAGATTGAGAAATTCAATACAGGCAACACACAAGAGGTTCATAATTACTATCAGCATGAAGAAGAAGAACATGAGAGAAAGCCAGAAATTCAGAAGTTGGTGAATTACCAACTGTACATGGACACATCGGATTCGGTTCCGAAGCTGCACACAGACTCGAGCAGCTCCGGGCACGTGGTTTCACCGGATGTCACGTGTGACAGGGAGGTGCAGAGTGAACCAAAATGGAATGAACTTGGGATACAGCTGGATGACGCGTTTGGTTTTGAGTTCAATTACTTGGATAATAGCCTTTCATTTGAGTATGAGGATGACCCTTTTGGGACCAATGATCAGTTCCAAATCAACCAGCTTTCGCCGTTACAGGATATGTTCATGTACCAACAAAAGCCATTTTGA 876 0.4269 MQGELELPPGFRFHPTDEELVNHYLCRKCAGHSISVSVVKEVDLYKFDPWQLPEMGYQSEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKVKPMGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKFNTGNTQEVHNYYQHEEEEHERKPEIQKLVNYQLYMDTSDSVPKLHTDSSSSGHVVSPDVTCDREVQSEPKWNELGIQLDDAFGFEFNYLDNSLSFEYEDDPFGTNDQFQINQLSPLQDMFMYQQKPF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi354g00047 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Vivi354g00047 291 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Vivi354g00047 291 PANTHER NAC TRANSCRIPTION FACTOR 56 7 200 - -
Vivi354g00047 291 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Vivi354g00047 291 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Vivi354g00047 291 FunFam NAC transcription factor 16 161 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi354g00047 1 291 NAC Transcription Factor Family AT1G01720 61.842 3.11e-122 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi354g00047 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi354g00047 - - gmx:100814504 460.685