Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi351g00016 ATGGCAGAGGCCTTACTAGGAGTAGCATTTAAGAATTTGATGGCTCTGCTTCAAAATGAATTTTCTATCACTTCCCAAATCAAGTCAAAGGCTGAAAAGCTATCAACCACCTTAGGTCTCATCAAGGCTGTCCTTGAAGATGCTGAGCGGAAACAAGTCACTGACAGCTCTATTAAGGTGTGGCTGCAACAACTCAAAGATGCTGTATATGTGCTAGATGATATCCTTGATGAATGTTCCATTCGATCTACCCGGCTGAGGGGCTCACTTTCTATCAACCCAAAGAACTTTATTTTTCGCCATGACATAGGCAAGAGGTTGAAAGAAATTACAAGGAGATTAGACCATCTTGCTGATAGTAAAAACAAATTTCTTCTACAAGAGAGTATTACTATTAGGAAGAGCTCAATTGAAGTACCTGAATGGCGCCAAACCAGCTCTTTTATTGCTGAACCTAAAGTTTTTGGACGGCAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTTACCCAAGCAAGGGACTCTGACTCTCTTTCCATCTATCCCATTGTTGGCTTAGGCGGTGTTGGAAAAACAACTCTTGTTCAGTTGGTCTACAATGATGTCAGGGTGACTGGAAATTTTAATACAAAAATTTGGGTTTGCGTTTCTGAGGCATTTTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCACATCTAAGAAGTGTGATTCCTTACCTTTAGATGCAATACAACTAAAGGTGCAAGGTTTGTTGCAAGGTAAAACCTATTTTCTAGTTTTAGATGATGTATGGAACAAAACTCAACAAATAGAATCTGGATTAAGCCAAGAGAAATGGAATAAGTTGAAATCCGTGTTGTTGTGTGGATCTAGAGGTTCTTCCATTTTAGTTTCCACTCGAGATGAGGATGTTGCGGAAATTGTGAGAACATGCCAAACTTATCATTTGTCTGGTCTCCCAGAAAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGAGCACAACAGAGAAGAACGCCCAGAACTTGTGGCAATAGGTAAGGAGATAGTAAAGAAATGCGGTGGATTGCCTCTTGCGGCACAAGCATTGGGAGGTCTGATGCGACCTAGGAGGGGAGAAAAAGAATGGCTTGAAGTAAAAGAGAGCAGAATTTGGGCTTTAACACATGAGAATATCTTGCCTGCTTTGAGGTTGAGCTACTTTCACTTAACTCCGACCTTAAAGCAGTGCTTTTCTTTTTGTGCAATATTTCCCAAAGATAGAATAATCATGAAAGAAGAGCTGATTCATCTTTGGTTGGCTAATGGATTTATTTGGTCTAGAGAAAATTTGGAGGCCGAAGATGTTGGCAGCATGATTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATCAAGATTGATGAATATTCTGGAGACATTTCTTTTAAGATGCATGATCTTGTCCACGATCTTGCTCAGTCGATAATGGGGCAAGAATGTGTGATTTTAGAGGATGAGAACATGGCTAATTTGTCCAAAAGTACCCATCATATTAGCTTTTACTTTGGTCCTTATTTATCAGTGGATGAGAGTGCTTTGAAAAAAGTAGAGTCCTTACGCTCAATGTTTGAGTTGAATCGTGATAGATATCTACAAACTGATTACTTCCCATTCCCAACAAACTCTTCTCTTCGGGTTTTACGCATTTCCCCTTTCCAGGTATTATCACTCGGAAGCTTAATTCATTTGAGGTATTTGGAACTTTATGATCGTAAGTTCGAAAACATCCCTGACTCAATTTGTAACTTGCACAAACTGGAAATCTTGAAATTGATGAATCTTTCAGAATTGAGATGTCTACCGAAACGTTTGGCTTGCTTACAAAATCTTAGGAATCTTGTCATTGAAGATTGTGATTCACTTTCTCAATTGTTTCCCTACATTGGAAAATCATCTCGCCTAAGAACATTAAGTGTATACATCATTGGTTTAGAGAGAGGGCAAAGTTTGATAGAACTACACAATCTAAACCTTAGAGGAAAACTGAATATTAAAGGGTTAAAATATGTTGGTAGTTTATCTCATACTCAAGATGCCAATTTGACAGCTAAAAAAGAAATCCATGAAGTATGCATGTCATGGAGCGTCGATGATTATATTACTGACACCCCGACTGTTAGTTCCGAGCAAGTATTAGAAGGGCTTCAGCCACACACAAATCTCAAAAGCTTGAAGATACATTACTATAATGGCTTATGTTTCCCAAGTTGGATCCAAACTCTAACTAGTTTAGTTTCTCTTGAACTCAAGGGTTGCAACAACTGTGTGCAGCTTTCAGGACTTGGTAAACTACCATCTCTTAAGAAACTCGAACTACGTGATATGAATAATCTGAAATTTGTGGATGATAATGATGATGACGATGGCGAATCTCACAACAGTATGAACGTGAAGATTTTCCCATCTCTTGAGGAACTCATATTATTTAATTTACCAGGATTAGAGAAGTTGTTGAAACTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTTTTTTAAGAATTTCCTTTTGCCGTCAACTTAGATTGTCATGTCTTCCATATGTTAAACGCCTCTCTGTATTTGGATGTAACAATGAGTTACTGAGTTCAATCTCTAGCTTCTATGGTCTTACTGCCCTTTACCTTGGTATAGGTACAGGAATAACATCCTTTCCAGAGGGGATGTTCAGAAACCTTACTTGTCTTCAAACTCTAGAAGTAGATGCCTTTTCGAACTTGAAGGAGTTACCAAATGAACCCTTTAACCTTGCTTTGATACGTCTGCATATCACTTACTGCAATGAGCTTGAGTCTTTACCAGAAAATATTTGGGAAGGTCTGCAATCCCTTCGATCCTTGACAATTAGTAGTTGTAAAAAATTGAGATGCTTTCCGGAAGGTATTCAACACCTCACTTCTCTAAAGGTGCTGAATATTTTTTATTGCCCAACATTAGAGGAGCGATGCAAGAAGGAAACGGGGAAGGACTGGAACAAGATAGCGCATATTCCAAAAATAATTATTGTTTAG 3066 0.3826 MAEALLGVAFKNLMALLQNEFSITSQIKSKAEKLSTTLGLIKAVLEDAERKQVTDSSIKVWLQQLKDAVYVLDDILDECSIRSTRLRGSLSINPKNFIFRHDIGKRLKEITRRLDHLADSKNKFLLQESITIRKSSIEVPEWRQTSSFIAEPKVFGRQDDKEKIVEFLLTQARDSDSLSIYPIVGLGGVGKTTLVQLVYNDVRVTGNFNTKIWVCVSEAFSVKRILCSIIESITSKKCDSLPLDAIQLKVQGLLQGKTYFLVLDDVWNKTQQIESGLSQEKWNKLKSVLLCGSRGSSILVSTRDEDVAEIVRTCQTYHLSGLPENECWLLFKQYAFEHNREERPELVAIGKEIVKKCGGLPLAAQALGGLMRPRRGEKEWLEVKESRIWALTHENILPALRLSYFHLTPTLKQCFSFCAIFPKDRIIMKEELIHLWLANGFIWSRENLEAEDVGSMIWNELCQKSFFQDIKIDEYSGDISFKMHDLVHDLAQSIMGQECVILEDENMANLSKSTHHISFYFGPYLSVDESALKKVESLRSMFELNRDRYLQTDYFPFPTNSSLRVLRISPFQVLSLGSLIHLRYLELYDRKFENIPDSICNLHKLEILKLMNLSELRCLPKRLACLQNLRNLVIEDCDSLSQLFPYIGKSSRLRTLSVYIIGLERGQSLIELHNLNLRGKLNIKGLKYVGSLSHTQDANLTAKKEIHEVCMSWSVDDYITDTPTVSSEQVLEGLQPHTNLKSLKIHYYNGLCFPSWIQTLTSLVSLELKGCNNCVQLSGLGKLPSLKKLELRDMNNLKFVDDNDDDDGESHNSMNVKIFPSLEELILFNLPGLEKLLKLERGEMFPCLSFLRISFCRQLRLSCLPYVKRLSVFGCNNELLSSISSFYGLTALYLGIGTGITSFPEGMFRNLTCLQTLEVDAFSNLKELPNEPFNLALIRLHITYCNELESLPENIWEGLQSLRSLTISSCKKLRCFPEGIQHLTSLKVLNIFYCPTLEERCKKETGKDWNKIAHIPKIIIV 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi351g00016 1021 Gene3D - 6 118 - -
Vivi351g00016 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 418 IPR027417 -
Vivi351g00016 1021 Gene3D - 410 493 IPR036388 -
Vivi351g00016 1021 SUPERFAMILY RNI-like 818 998 - -
Vivi351g00016 1021 PRINTS Disease resistance protein signature 957 973 - -
Vivi351g00016 1021 PRINTS Disease resistance protein signature 180 195 - -
Vivi351g00016 1021 PRINTS Disease resistance protein signature 253 267 - -
Vivi351g00016 1021 PRINTS Disease resistance protein signature 357 371 - -
Vivi351g00016 1021 Pfam Rx N-terminal domain 6 92 IPR041118 -
Vivi351g00016 1021 CDD RX-CC_like 2 119 IPR038005 -
Vivi351g00016 1021 FunFam Probable disease resistance protein At1g63360 404 493 - -
Vivi351g00016 1021 Pfam NB-ARC domain 158 385 IPR002182 GO:0043531
Vivi351g00016 1021 SUPERFAMILY L domain-like 482 859 - -
Vivi351g00016 1021 Gene3D Ribonuclease Inhibitor 527 857 IPR032675 -
Vivi351g00016 1021 PANTHER DISEASE RESISTANCE PROTEIN RP 41 855 IPR044974 GO:0006952
Vivi351g00016 1021 Gene3D - 321 408 IPR042197 -
Vivi351g00016 1021 Gene3D - 140 317 IPR027417 -
Vivi351g00016 1021 Gene3D Ribonuclease Inhibitor 858 1008 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi351g00016 183 498 WRKY Transcription Factor Family AT5G45050 24.922 2.38e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi351g00016 - - mtr:11405813 1264.21