Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi351g00014 ATGGCTGAGGCCTTGCTTGGATTTGTGTTAGAGAATTTGTCATCTCTGCTTCAGGATGAACTTTCCACCGTTTTCGGAATCAAGTCAAAGGCTGAAAAGCTATCAACCACCTTAGATCTCATCAAGGCTGTCCTTGAAGATGCTGAGCAGAAACAAGTCACTGACCGCTCTGTTAAGGTATGGCTGCAACAACTCAAAGATGCTGTATATGTGCTTGATGATATCCTTGATGAATGTTCCATTCGATCTACCCGGCTGAGGGGTATCAACTTAAAGAATTTACTTTTTCGTCGTGACATAGGCAAGAGGTTGAAAGAAATTACAAGGAGATTAGACGATCTTGCTGATAGTAAAAGCAAATTTATTCCTCGAGAGGGTATTAATATTAGGGAAAGCTCAATTGAAGTACCTGAATGGCGCCAAACCAGCTCTTTTATTGCCGAACCTAAAGTTTTTGGACGAGAAGATGATAAAGAAAAGATTGTTGAGCTTCTTCTCACCCAAGCGAAGGACTCTGACTCTCTTTCCATCTATCCCATTGTTGGCTTAGGCGGTGTTGGAAAAACAACTCTTGCTCAGTTGGTCTACAATGATGTTAGGGTGACTGTCAATTTTAATACAAAAATTTGGGTTTGCGTTTCTGAGGCATTTTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCACATCTGAGAAGTGTGATTCTTTATCTTTAGATGCAATACAACTAAAGGTGCAAGGTTTGTTGCAAGGTAAAAGATACTTTCTAATTTTAGATGATGTATGGAACAAAACTCAACAAATAGAGTCTGGATTAAGCCAAGAGAAATGGAATAAGTTGAAATCTGTGTTGTTGTGTGGATCTAGAGGTTCTTCCATTTTAGTTTCCACTCGAGATGAGGATGTTGCGGAAATTGTGAGAACATGCCAAACTTATCATTTGTCTGGTCTCCCAGAAAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACACAACAGAGAAGAACGCACAGAACTTGTGGCAATAGGTAAGGAGATAGTAAAGAAATGCGGTGGATTGCCTCTTGCGGCACAAGCATTGGGAGGTCTGATGCGATCTAGGAGGGGAGAAAAAGAATGGCTTGAAGTAAAAGAGAGCAGAATTTGGGATTTAACACATGAGAATTCAATCTTGCCTGCCTTGAGGTTGAGCTACTTTCATTTAACTCCGACCTTAAAGCAGTGTTTTTCTTTTTGTGCGATATTTCCCAAAGATAGCATAATCATGAAAGAAGAACTGATTCAACTTTGGTTGGCTAATGGATTTATTTCGTCTAGAGAAAATTTGGAGGTCGAAGATGTTGGCAACATGATTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGAGATCAAGATTGATACATATTCTGAAGACATTTCTTTTAAGATGCATGATCTTGTCCACGATCTTGCTCAGTCGATAATGGGGCAAGAATGTGTGATTTTAGAGGATGAGAAGACTAAATTGTCCGAAAGTACCCATCATATTAGCTTTCACTTTGGTCCCAATTTATCGGTGGATGAGAGTGCTTTGAAAAAATTAGAGTCCCTACGCACAATGTTTGAGTTGAATCGTTGTCCATATTCATGGGGCCTTTCCCATTCCTTACAAACTGATCACTTCCCATTCCCCACAAACTATTCTCTTCGGGTTTTACGCATTTCCCCATTCCAGGTATTATCACTCGGAAACTTAATTCATTTAAGGTATTTGGAACTTTATGGTTGTGACATTCAAAACATCCCTAATTCGATTTACAACTTACGTAAATTGGAAATCTTGAAATTAAAAAGTCTTGCAAAACTGAGATGTCTACCGAAGCGTTTGGCTTGTTTACAATATCTTAGGCATCTTGTCGTCGAACGTTGTGATTCACTTTCTCAATTGTTTCCCGACGTTGGGAAATTAACTTTCCTAAGAACATTAAGTGTATACATCGTTAGTTTAAAGAGAGGACAAAGCTTGACAGAACTACGTGATCTAAACCTTGGAGGGAAACTGAATATCAAAGGGTTAAAAGATGTTGGTAGTTTATCTCATGCTCAAGATGCCAATTTGACAGCTAAAAAAGAACTCCAGAAAGTATGCATGTCATGGAGCATCAATGATGAAATCACCGAGACCCCGAGTTTTAGTTCCGAGCAAGTACTAGAAAGGCTTCAACCTCACACAAATCTCAAAAGCTTGAAGATACGTTACTATAACGGATTATGTTTCCCAAGTTGGATCCAAACTCTAACTAGTTTAGTTTCTTTGGAACTTAAGGGTTGCAACAAGTGTGTGCGACTTTCACCACTTGGGAAACTACCATCTCTTAAGAAACTGAAACTATGTGATATGAATAATGTGAAATATGTGGATGATAATGATGATGATGGTGACGAATCTCACAACAGTATGGACGTGAAGATTTTCCCATCTCTTGAGGAACTCATATTATTCAGATTACCAAGATTGGAGAGGTTGTTGAAAGTGGAAAGAAGGGAGATGTTTCCTTGTCTTTCTTTTTTAAGAATTTCCTTTTGCCCTCAACTTAGATTGCCATGTCTTCCATATGTTAAAGACCTTCATGTATATGGGTGTAACAATGAGTTACTGAGTTCAATCTCTAGCTTCTATGGTCTTACTACCCTTTACCTTTGTATAGGTAGTGGAATAACATCCTTTCCAGAGGGGATGTTCAGAAAGCTTACTTGTCTTGAATCTCTAAATGTACAGTATTTTGAGAACTTGAAGGAGTTACCAAATGAACCCTTTAACCTTGCTTTGGAATATCTGGAAATCATTGGGTGCATTGAGCTTGAGTCTTTACCAGAAAAAATTTGGGAAGGTCTGCAATCCCTTCAAACCTTAGAGATTCATTATTGTAAAGAATTGAGATGCCTGCCGGAGGGTATTCGACACCTCACTTCTCTAGAGGTTCTGAAAATTTATGGCTGCCCAACATTAGAGGAGCGATGCAAGAAGGAAACAGGGGAGGACTGGAACAAGATTGCGCATATTCCACGAATAATTATTCCCTGCCCCTCGTTATATCCCCCTCCAAATTGGATGGGTATGAATGAAATAATATAA 3129 0.3877 MAEALLGFVLENLSSLLQDELSTVFGIKSKAEKLSTTLDLIKAVLEDAEQKQVTDRSVKVWLQQLKDAVYVLDDILDECSIRSTRLRGINLKNLLFRRDIGKRLKEITRRLDDLADSKSKFIPREGINIRESSIEVPEWRQTSSFIAEPKVFGREDDKEKIVELLLTQAKDSDSLSIYPIVGLGGVGKTTLAQLVYNDVRVTVNFNTKIWVCVSEAFSVKRILCSIIESITSEKCDSLSLDAIQLKVQGLLQGKRYFLILDDVWNKTQQIESGLSQEKWNKLKSVLLCGSRGSSILVSTRDEDVAEIVRTCQTYHLSGLPENECWLLFKQYAFGHNREERTELVAIGKEIVKKCGGLPLAAQALGGLMRSRRGEKEWLEVKESRIWDLTHENSILPALRLSYFHLTPTLKQCFSFCAIFPKDSIIMKEELIQLWLANGFISSRENLEVEDVGNMIWNELCQKSFFQEIKIDTYSEDISFKMHDLVHDLAQSIMGQECVILEDEKTKLSESTHHISFHFGPNLSVDESALKKLESLRTMFELNRCPYSWGLSHSLQTDHFPFPTNYSLRVLRISPFQVLSLGNLIHLRYLELYGCDIQNIPNSIYNLRKLEILKLKSLAKLRCLPKRLACLQYLRHLVVERCDSLSQLFPDVGKLTFLRTLSVYIVSLKRGQSLTELRDLNLGGKLNIKGLKDVGSLSHAQDANLTAKKELQKVCMSWSINDEITETPSFSSEQVLERLQPHTNLKSLKIRYYNGLCFPSWIQTLTSLVSLELKGCNKCVRLSPLGKLPSLKKLKLCDMNNVKYVDDNDDDGDESHNSMDVKIFPSLEELILFRLPRLERLLKVERREMFPCLSFLRISFCPQLRLPCLPYVKDLHVYGCNNELLSSISSFYGLTTLYLCIGSGITSFPEGMFRKLTCLESLNVQYFENLKELPNEPFNLALEYLEIIGCIELESLPEKIWEGLQSLQTLEIHYCKELRCLPEGIRHLTSLEVLKIYGCPTLEERCKKETGEDWNKIAHIPRIIIPCPSLYPPPNWMGMNEII 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi351g00014 1042 Gene3D - 318 400 IPR042197 -
Vivi351g00014 1042 CDD RX-CC_like 2 116 IPR038005 -
Vivi351g00014 1042 SUPERFAMILY L domain-like 466 1017 - -
Vivi351g00014 1042 Gene3D - 6 115 - -
Vivi351g00014 1042 Pfam NB-ARC domain 154 382 IPR002182 GO:0043531
Vivi351g00014 1042 Gene3D - 401 492 IPR036388 -
Vivi351g00014 1042 PRINTS Disease resistance protein signature 961 977 - -
Vivi351g00014 1042 PRINTS Disease resistance protein signature 177 192 - -
Vivi351g00014 1042 PRINTS Disease resistance protein signature 354 368 - -
Vivi351g00014 1042 PRINTS Disease resistance protein signature 250 264 - -
Vivi351g00014 1042 PANTHER DISEASE RESISTANCE PROTEIN RP 34 841 IPR044974 GO:0006952
Vivi351g00014 1042 FunFam Probable disease resistance protein At1g63360 402 491 - -
Vivi351g00014 1042 Gene3D - 138 314 IPR027417 -
Vivi351g00014 1042 Coils Coil 31 51 - -
Vivi351g00014 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 416 IPR027417 -
Vivi351g00014 1042 Gene3D Ribonuclease Inhibitor 512 667 IPR032675 -
Vivi351g00014 1042 Gene3D Ribonuclease Inhibitor 668 868 IPR032675 -
Vivi351g00014 1042 Gene3D Ribonuclease Inhibitor 869 1013 IPR032675 -
Vivi351g00014 1042 Pfam Rx N-terminal domain 6 87 IPR041118 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi351g00014 180 799 WRKY Transcription Factor Family AT5G45050 23.664 3.77e-11 65.9