Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00060 ATGTCTGATCCTACCCTCGCCGCGCAACCGCCGGAGCAATTGTCGTCCGATATGGATTTCGATGACTTCGCCGGTCAGTTCAACAACATCCCTGTCCCTTCATTAGAGGATTTCTTCAACGAAGATGCCCTTGATTCAGAGCCTCTCCCTTCCGATCTGGAATTTCCGTTGGGAGATTTCGAGTTCACCTTTGACGATATTGAAAATCTCTCCATCCCTGCTGGTACGGATGATTTTCTTCTTTCTGAAGCATGGAACCAGAATACTAATGGCACTCCAATTTCGCCTATGATTGGTGATTGTATCAATGGTGATGGTAATTGTTCTCCGAAGAATTTCGATTCGCCGGGATCAGGTGTTTCTGTGGTTTCTGGTGGTCAAAGCGATCAGAGCCAAGGTGTTTCTAGGTTTCTTAATTCAGAATCGGTTTCTGCTGAAGATAACTCGGTTGATGTTGATGCTGATGTTAAAGTTTCGACCATTCCTTTGCCGGAGACTGAAATTAGCGACCGGGATGAGTCCTCGAATGGACCGGTTTCTTCTCAGGGATCGGGGAATGGTGGATCTGGTGTATATGAAGCCATGAACTCGCCGTCACATGACTCTGGCAGTTATGAGAGGGATATTTCATCTTCTCGTGAACATGCAGCTGTGGAAGAGGGTGTAAAAGTGGAGGGAATTGTTAAAGGCTCTGATCTGAAGAGGAAGAAAGAAAATAGCCATGTAAGTGCTGAGAATAGAACCCCAAAATGTAGTAGAAGGTCGTCCTCAATGGAAAACAAGATCCAACCACAGCAGCAGTCTCAATCTGGTTTTGATGGAATTGAAGATGATGATGAGAAGAGGAAGGCAAGGTTGATGAGGAATAGAGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGATCGATGCATTCGACAATTGCTGATTTAAGTAGTAAGATCACTTATGTCATGGCTGAGAATGCTACACTTAGACAGCAATTGAGTGGCGGTGTTATGTGTCCACCTCCACCACCAGGTTCTGGGATGTACCCTCATCCTCCAATGGCACATATGCCTTATCCTTGGATGCCTTGTGCTCCTTATGTTGTTAAACCTCAAGGGTCTCAGGTTCCTTTGGTTCCAATTCCAAGGTTGAAACCTCAGCAACCAGCTGTGTCTTCTAAGAGTAAAAAGAACGAGAGTAAGAAGACTGAGACTAAGAAGACTGAGGTGAAAACTAAGAAGGTTGCTAGTATTAGTTTGTTGGGTTTGTTTTTCTGTATCCTGCTTTTTGGCGGACTTGTTCCTTTGGTAGATTTTAAGTTTGGAGGTTTAGTTGATAACCTTTCTGGTAGGTCTAGTTATGTTAGTGATAGATGGTTGTATGGTCAGGGTGGAAGTAGGATTTGGCCTGTAAATGATCCTATGAAAGAATCTGGAAGGGATGGGGAAGTGGGGTTATCCAATGGAAGGTTTGGTGTTTCTGATAGGAACAATTATGAGAGAGGCCGGAAACTAGGTGAAGAAATGAATGAACTGAAAAACTCGAGTTGTTTTGGTCATCGAGACAACGCCAGCGAGCCACTTCTTGCTTCTTTGTATGTTCCTAGGAATGATAAGTTGGTGAAGATTGATGGAAACTTGATAATCCATTCGATTATGGCCAGTGAGAAAGCAATGGCATCACAAGATGCTCAAGGAAAGGAGAAGATTAAAACTGGTTTGGCCATTGCTAGGGATTCTGCATTAGCTATTCCTGAAGTTGGAAGAAATAGAGGTCAGCATCCAAATGTGTATAGGGTTTCTGCCGAACAGAGAAGGGCTATTGGCTCTGGCTCAGCCAAAACCTTGAAGGACCATATGAAGTCTTCTGCAACTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGAATTGCAGGTCCAATGCTAAGTTCTGGCATGTGTACTGAAGTTTTTCAGTTTGACGCCTCTCCAGCTCCTGGAGCTATAGTTCCAGCAACAACAGTGACTAAAATTTCTACTGAAAGCCGTCACAATGCTACCACTATCAACATGAGCAGAAACAGAAGAATCCTCCATGGGCTCCCAGATCCTCTCCCTGGATCCAAACTGAACATAACTGAAGAACATGCAAGAACTTTGCCAAAAGACCACCTCCCTGGTAATAAGTCTTCCATGGTGGTTTCAGTTCTTGTTGATCCCAAAGAGGCCGGAGATGGTGATGTTGATGGTATGATGGCTCCAAAGTCACTCTCTCGGATTTTTGTTGTTGTGCTGCTCGACAGTGTCAAGTATGTGACTTACTCATGTGGTCTTCCTCGAGCTTCTCCTTTGGTGACTGCTTATGTTTGA 2367 0.4444 MSDPTLAAQPPEQLSSDMDFDDFAGQFNNIPVPSLEDFFNEDALDSEPLPSDLEFPLGDFEFTFDDIENLSIPAGTDDFLLSEAWNQNTNGTPISPMIGDCINGDGNCSPKNFDSPGSGVSVVSGGQSDQSQGVSRFLNSESVSAEDNSVDVDADVKVSTIPLPETEISDRDESSNGPVSSQGSGNGGSGVYEAMNSPSHDSGSYERDISSSREHAAVEEGVKVEGIVKGSDLKRKKENSHVSAENRTPKCSRRSSSMENKIQPQQQSQSGFDGIEDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKITYVMAENATLRQQLSGGVMCPPPPPGSGMYPHPPMAHMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPAVSSKSKKNESKKTETKKTEVKTKKVASISLLGLFFCILLFGGLVPLVDFKFGGLVDNLSGRSSYVSDRWLYGQGGSRIWPVNDPMKESGRDGEVGLSNGRFGVSDRNNYERGRKLGEEMNELKNSSCFGHRDNASEPLLASLYVPRNDKLVKIDGNLIIHSIMASEKAMASQDAQGKEKIKTGLAIARDSALAIPEVGRNRGQHPNVYRVSAEQRRAIGSGSAKTLKDHMKSSATDGKMQQWFREGIAGPMLSSGMCTEVFQFDASPAPGAIVPATTVTKISTESRHNATTINMSRNRRILHGLPDPLPGSKLNITEEHARTLPKDHLPGNKSSMVVSVLVDPKEAGDGDVDGMMAPKSLSRIFVVVLLDSVKYVTYSCGLPRASPLVTAYV 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00060 788 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 55 783 - -
Vivi34g00060 788 MobiDBLite consensus disorder prediction 206 254 - -
Vivi34g00060 788 MobiDBLite consensus disorder prediction 255 272 - -
Vivi34g00060 788 MobiDBLite consensus disorder prediction 1 22 - -
Vivi34g00060 788 Gene3D - 279 341 - -
Vivi34g00060 788 FunFam bZIP transcription factor 49 280 342 - -
Vivi34g00060 788 MobiDBLite consensus disorder prediction 109 282 - -
Vivi34g00060 788 MobiDBLite consensus disorder prediction 109 147 - -
Vivi34g00060 788 Coils Coil 304 324 - -
Vivi34g00060 788 CDD bZIP_HY5-like 282 333 - -
Vivi34g00060 788 Pfam bZIP transcription factor 281 339 IPR004827 GO:0003700|GO:0006355
Vivi34g00060 788 SUPERFAMILY Leucine zipper domain 281 339 IPR046347 GO:0003700|GO:0006355
Vivi34g00060 788 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Vivi34g00060 788 MobiDBLite consensus disorder prediction 385 413 - -
Vivi34g00060 788 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 339 IPR004827 GO:0003700|GO:0006355
Vivi34g00060 788 MobiDBLite consensus disorder prediction 173 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00060 27 786 bZIP Transcription Factor Family AT2G40950 48.656 2.33e-173 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi34g00060 bZIP_1 5.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00060 K25783 - gmx:100101871 874.004