Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00059 ATGATCTGCACCAAATATGCTTCAATTCGGGACGGCGACAAGCTTAGAAATCAAGATCAGATGATAACACCATCAGTTCTGCATGCAATTGAAATGTCTAGAGTTTCTATTGTTGTTTTCTCAAAAAATTATGCTGACTCGACTTGGTGTCTGCAAGAGTTGGAGAAAATATTGGAGTGTTACCGAACTGCAGATCAGATGGTTTTGCCTGTGGTCCACGATGATGAAGATATGCTTGAAGAAACTTTTATGGATCTTGCAGTAAGAATCTTGAAGAAAGTTGAACCAGGGTTCGAAGATTTTGACATTTCAGGATTTAGTGTGGTTTCCAGGAATGAAAGTGAGTATATCAAGGATATAGTAGAACATGTTAATAGTTTGCTAGACAGAACATATTTATTTGTTGCTGACCATCCAGTGGGGGTAGATTCTCGTGTTCAAGATGTTATTCAACTATTGAACAGTCAAGAATCAAAAGACCCTGTACTGATTGGATTATGGGGCATGGCAGGGATTGGCAAAACAACAATTGCTAAAGCTGTTTATAATCAAATTCGTTACGATTTTGAGGGAAATAGCTTCCTCCTAAATGTCGCAAAAAATTGGAAACAATATAATGGCAAAGTTTCTCTACAACGACAACTTCTTTCTGATATCTACAAAACAAAACAAAAAATAATGATAGATACAGTTGAATCAGGAAAATTGATATTACAGGAAAGACTTTGCCAAAAGAGGATACTTCTTGTGCTCGATGATGTGAGTGAATTGGACCAATTGAATGCTTTGTGCGGAAGTCCCAAATGCTTTGGTCAAGGAAGTAAAATAATCATCACATCAAGAGATCCACATATACTTCATGCTCATTACGTTAACCATGTATACGAAATAAAATCAATAAACCAATATGAATCGCTTCAACTTTTTAGTTGGCATGCCTTCGAGAAACCAAGTCCTATGCATGATTTTTCTGATCTTTCTAGAGATTTTATTGATTACTTCAGGGGAGTGCCACTTGTTATTCAAGTCATTGGGTCCTTTTTGTTGACTAGTCGAAGCAAAACATTATGGATAAGTGTTTTGGAGAAACTCAAATGCATTCCCAACGACAATGTAATTGACAAACTGAGAATAAGTTACGATGGTTTAAGGGATAATGATATGAAAGATATATTCCTTGATATTGCCCAGTTCCTTATTGGGATGGACCTGAAAGCTGCAACTAAAATACTGAAAGACTCTGAACTTTCTGTAGATATTGGTATGAGTATCCTTGTACAACAAAACCTTGTAACTGTTGATCGGATGAACAAGATTGGAATGCATGATTTGTTAGAAGACATGGCAAGTGAGATCATAAGGAGAAAGTCAGAGAGGGTGGATAAGAAAAGGATCTATGATGTGTTCTTGAGTTTTAGAGGGGAAGACTGTCGTGCAAATTTCATTTCACATCTCTATACCTCCCTTCAAATTGCTGGGATTTATGTTTTCAAAGATGATGCTGAGATTCAACAAGGAGATCAGATCTCAGCCTCACTTTTGGAAGCAATAGGACAGTCTAGAATCTGTATCGTTGTTTTGTCTAGTAACTATGCTAATTCAAGATGGTGTATGATAGAGTTGGAGAAAATCATGGACAGAAGCAACAGTCTGGTGGTTATACCAGTGTTCTATGAGGTAGATCCTTCAGAAGTACGACATCAAACTGGCAGGTTTGGAGAAGGTTTTAAAAATCTCCTCTCAGGAATCTCAGTGAATAGTTATAGGGAGATGAAATGGAAAACAGCACTTCTTAAAGTTGGTGGCACATCAGGAGTTGTCGTCATAAACTCCAGGAATGAAAGTGAGGATATCAGGAAAATAGTAAACGATGTTACTAAGTTACTAGACATAACAGACTTATTCGTTGCTGACCATCCAGTGGGGGTAGATTCTCGTGTTCAAGATATTATTCAACTATTGAATAATCAAGAATCAAATGACCCTTTACTGCTTGGAATATTGGGCATGGGAGGAATCGGCAAAACAACAATTGCTAAAGGTGCTTATAATAAAATTCGTCACAATTTTGAGGCAAAGAGTTTCCTCTTAAATGTCAGGGAAATTTGGGAACAAGATAATGGAAAAGTTTCTCTACAGCAACGACTTCTTTCTGATATCTACAAAACAACGAAAATAAATATAGATACAGTTGAGTCGGGAAAAATGATTTTGCAGGAAAAACTTCGGCAGAAGAGGATATTTCTTGTGCTTGATGATGTGAATAAACTGGACCAATTGAATGCTTTGTGTGGAAGTCATGAATGGTTTGGCGAAGGAAGTAGAATAATCATCACTACAAGAGACGGTGATTTACTTCACGGGCTTAAGGTGGACCATGTGTATAGAATGAAAAAAATGAACGGCGATGAATCTCTTCAACTTTTTAGTTGGAATGCCTTCAAGGAACCAAGTCCTATTGATGGTTTTGCCGGCCTTTCTAGAGATTTTGTTAAGTACTGTGGGGGATTGCCGCTAGCTCTTCAAGTTATTGGGTCCTTTTTGATGACTAAGAGAAGAAAAATAGAATGGAAGAGTGTATTGGAGAAACTCAAACTCATTCCCAATGAGGAAGTGTTAGAAAAACTTCGAATAAGTTTTGACGGTTTAAATGATTATGATATGAAAGAAATATTCCTTGATATTGCTTTTTTCTTTATTGGGATGGACCAAGAAGACGTGACTAAAATATTGGAAGACTGTGGGCATTATGCAGGTATTGGAATAAGTGTCCTTGTTCAAAGAAGTCTTGTAACTGTTGATAGTAAGAACAAGATTGGAATGCATGAATTGCTACAAGACATGGGAAGAGAGATTGTCAGTAAGATATCAAGAGAGGGAAACAAGGATCCTAGTAGGTTATGGCGTTACGAGGATGTGAATTCTTTGTTGTCAAAGGATACTAGAACTTTATATGTTAAGGGACTGACATTAAAGATATCAAGAATGGACTCCACAACTTATTTGGACTCTAAAACATTTGAGAAGATGGATAAGCTTAAATTACTTCAACTTGCTGGCATAAAATTTAATGGAAATTACAAATATATTTCAAGAGAACTTAGATGGCTTTGTTGGCATGGGTTTCCTTTAAAATATACACCAACTGACTTTCATCAAGAACGTTTAGTTTCTGTTGACTTCAAATATTCCAATCTGGAACGAGTATGGAAGAAGTCCCAGTTTCTGAAGGGGCTGAAATTTCTTAATCTTAGTCATTCTCATAACTTGAGACAAACTCCAGACTTTTCAAACTTGCCAAATCTTGAAAAGTTGATACTCAAAGATTGTCCAAGTTTGTCCTCAATTTCTCCTACTATAGGACATCTCAAGAAAATTCTTTTAATAAATTTGAAAGACTGTACAGGCCTACGTGAACTTCCAAGAAGCATCTATAAATTGGAGTCACTGAAAACTCTCATTGTGTCTGGCTGTACAAAAATTGTCAAGTTGGAAGAAGATATAGAACAGATGACATCTTTGACCACCCTGGTTGCGGATAACACTGCTCTAACAAGAGTACCCTTTGCAGTAGTAAAATCAAAAAGCATTGGATATATTTCCTTGTGTGGATTCAAAGGATCCCCGCGTAATGTGTTTCCTTTAATTATTCAGTCTTGGATGTCTCCAACAAATGGTATGTTGTCCTTAGTTCAAACATTTGCAGGCACATCATCTCTTGAATTCTTTGATGAACAAGAAGATATTTTCTTTGGTCTGCCATCTATTCTTAAAGAACTTCCGAATCTTCAACGTCTTTTGTTGAAATGCGGGTCAGACACTCAACTAAATCAAACTCTAGCAAGTATTCTCGATAACTTACATACCCAAAGTTGTGAGGAGTTGGAAGCAATGCAAAACATACCACAATCCTCAAATTTTGTGGCTTTGGAATCAGCACATTATTTCAGTCAAGTTCGAATTTCAAGCTCACAAAAATCCTTGACATCACTTTTGATTCAGATGGGAATGAACTGCCATGTCACTAATACACTTAGAGAAAACATTTTACAGAAATTGCCTCCCAATGGATCTGGTTTACTCCCTAGTGACAATTATCCTGATTGGCTAGCCTTCAATGAAAAAGGTTCTTCTGTAACTTTTGAAGTACCTCAAGTGGATGAGCGTAATTTGAAAACAATCATGTGCATTGTCTATTCTTCTTCTCTAGATGACATTACATCAGAAAGTGTAGAAGACCTCAAAGTTTTGCTGCTGATAAATTTCACAAAGAAGACCATTCAGCTCTATAAGAAAGACGCGTTATTAGCCTCCTTTGATGAAGAGGAATGGCAGAAAGTAGTATCAAGTACAGAACCAGGTGACATAATGAAGCTTATTGTTGTTTTTGGAAGCAAAATCGTTGTGAAGAAGACAACAGTTTATTTTATCTATGATGAACCAATTGACGAAAAAACAAAGCACTGCCCAGAGCCAGATAAGAATATAATTGTTTCTAGTGGTGATGGAAATATATTTGGTAGACTGTTGTTCCGACTTCCTTCCCTTGTTCAAGCCGCTCTGATTTCACGACCTTTCTGGTTCTGTTTGGCTGTTATGCTGATTTGGTGGATTCGCTTCTGTTCTAACAAACACAGAAGTTTAAGGAAATGGCTTCCCAAAGCTCTCAAGGTTTCTGCAATCCAGTATCGAGGGACGAAATTTCTTTGGGTGATGTACAACAAAATTTTAAATTGCTGTCGTCGTGGTTAA 4752 0.3691 MICTKYASIRDGDKLRNQDQMITPSVLHAIEMSRVSIVVFSKNYADSTWCLQELEKILECYRTADQMVLPVVHDDEDMLEETFMDLAVRILKKVEPGFEDFDISGFSVVSRNESEYIKDIVEHVNSLLDRTYLFVADHPVGVDSRVQDVIQLLNSQESKDPVLIGLWGMAGIGKTTIAKAVYNQIRYDFEGNSFLLNVAKNWKQYNGKVSLQRQLLSDIYKTKQKIMIDTVESGKLILQERLCQKRILLVLDDVSELDQLNALCGSPKCFGQGSKIIITSRDPHILHAHYVNHVYEIKSINQYESLQLFSWHAFEKPSPMHDFSDLSRDFIDYFRGVPLVIQVIGSFLLTSRSKTLWISVLEKLKCIPNDNVIDKLRISYDGLRDNDMKDIFLDIAQFLIGMDLKAATKILKDSELSVDIGMSILVQQNLVTVDRMNKIGMHDLLEDMASEIIRRKSERVDKKRIYDVFLSFRGEDCRANFISHLYTSLQIAGIYVFKDDAEIQQGDQISASLLEAIGQSRICIVVLSSNYANSRWCMIELEKIMDRSNSLVVIPVFYEVDPSEVRHQTGRFGEGFKNLLSGISVNSYREMKWKTALLKVGGTSGVVVINSRNESEDIRKIVNDVTKLLDITDLFVADHPVGVDSRVQDIIQLLNNQESNDPLLLGILGMGGIGKTTIAKGAYNKIRHNFEAKSFLLNVREIWEQDNGKVSLQQRLLSDIYKTTKINIDTVESGKMILQEKLRQKRIFLVLDDVNKLDQLNALCGSHEWFGEGSRIIITTRDGDLLHGLKVDHVYRMKKMNGDESLQLFSWNAFKEPSPIDGFAGLSRDFVKYCGGLPLALQVIGSFLMTKRRKIEWKSVLEKLKLIPNEEVLEKLRISFDGLNDYDMKEIFLDIAFFFIGMDQEDVTKILEDCGHYAGIGISVLVQRSLVTVDSKNKIGMHELLQDMGREIVSKISREGNKDPSRLWRYEDVNSLLSKDTRTLYVKGLTLKISRMDSTTYLDSKTFEKMDKLKLLQLAGIKFNGNYKYISRELRWLCWHGFPLKYTPTDFHQERLVSVDFKYSNLERVWKKSQFLKGLKFLNLSHSHNLRQTPDFSNLPNLEKLILKDCPSLSSISPTIGHLKKILLINLKDCTGLRELPRSIYKLESLKTLIVSGCTKIVKLEEDIEQMTSLTTLVADNTALTRVPFAVVKSKSIGYISLCGFKGSPRNVFPLIIQSWMSPTNGMLSLVQTFAGTSSLEFFDEQEDIFFGLPSILKELPNLQRLLLKCGSDTQLNQTLASILDNLHTQSCEELEAMQNIPQSSNFVALESAHYFSQVRISSSQKSLTSLLIQMGMNCHVTNTLRENILQKLPPNGSGLLPSDNYPDWLAFNEKGSSVTFEVPQVDERNLKTIMCIVYSSSLDDITSESVEDLKVLLLINFTKKTIQLYKKDALLASFDEEEWQKVVSSTEPGDIMKLIVVFGSKIVVKKTTVYFIYDEPIDEKTKHCPEPDKNIIVSSGDGNIFGRLLFRLPSLVQAALISRPFWFCLAVMLIWWIRFCSNKHRSLRKWLPKALKVSAIQYRGTKFLWVMYNKILNCCRRG 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00059 1583 Pfam TIR domain 20 74 IPR000157 GO:0007165
Vivi34g00059 1583 Pfam TIR domain 466 627 IPR000157 GO:0007165
Vivi34g00059 1583 SUPERFAMILY Toll/Interleukin receptor TIR domain 457 605 IPR035897 -
Vivi34g00059 1583 Gene3D - 299 384 IPR042197 -
Vivi34g00059 1583 Gene3D - 799 884 IPR042197 -
Vivi34g00059 1583 SUPERFAMILY "Winged helix" DNA-binding domain 871 977 IPR036390 -
Vivi34g00059 1583 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 88 IPR035897 -
Vivi34g00059 1583 ProSiteProfiles TIR domain profile. 464 629 IPR000157 GO:0007165
Vivi34g00059 1583 SMART till_3 465 603 IPR000157 GO:0007165
Vivi34g00059 1583 Gene3D - 463 634 IPR035897 -
Vivi34g00059 1583 Gene3D - 636 794 IPR027417 -
Vivi34g00059 1583 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 466 1311 IPR044974 GO:0006952
Vivi34g00059 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 630 895 IPR027417 -
Vivi34g00059 1583 SMART AAA_5 160 301 IPR003593 GO:0016887
Vivi34g00059 1583 SMART AAA_5 661 801 IPR003593 GO:0016887
Vivi34g00059 1583 ProSiteProfiles TIR domain profile. 1 128 IPR000157 GO:0007165
Vivi34g00059 1583 Gene3D - 127 294 IPR027417 -
Vivi34g00059 1583 Gene3D - 4 126 IPR035897 -
Vivi34g00059 1583 PRINTS Disease resistance protein signature 664 679 - -
Vivi34g00059 1583 PRINTS Disease resistance protein signature 834 848 - -
Vivi34g00059 1583 PRINTS Disease resistance protein signature 741 755 - -
Vivi34g00059 1583 PRINTS Disease resistance protein signature 1097 1113 - -
Vivi34g00059 1583 SUPERFAMILY "Winged helix" DNA-binding domain 371 463 IPR036390 -
Vivi34g00059 1583 Pfam NB-ARC domain 144 365 IPR002182 GO:0043531
Vivi34g00059 1583 Pfam NB-ARC domain 645 865 IPR002182 GO:0043531
Vivi34g00059 1583 SUPERFAMILY L domain-like 996 1344 - -
Vivi34g00059 1583 Gene3D Ribonuclease Inhibitor 985 1214 IPR032675 -
Vivi34g00059 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 395 IPR027417 -
Vivi34g00059 1583 FunFam Disease resistance protein (TIR-NBS-LRR class) 462 631 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00059 29 496 WRKY Transcription Factor Family AT4G12020 26.078 1.04e-33 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00059 - - tpra:123891787 2063.5