Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00057 ATGGCTTCCTCTAGTTTTTCTTCCACTAACCAAGATTCTGAGTTGATATCTGACAATGATGAGAATCTAAGCTGGATCTATGATTTGTTTTTGAGTTTCTGTGATAAGGACGCTACCAAATCTTTTGCATACAATCTTGATACTGCTCTCACGGAGGCTGGAATTGTTGTTTTTAGGGACGGCGACAAGCTTAGAAATCAAGATCAGATGATAACACCATCAGTTCTGCATGCAATTGAAATGTCTAGAGTTTCTATTGTTGTTTTCTCAAAAAATTATGCTGACTCGACTTGGTGTCTGCAAGAGTTGGAGAAAATATTGGAGTGTTACCGAACTGCAGATCAGATGGTTTTGCCTGTGGTCCACGATGATGAAGATATGCTTGAAGAAACTTTTATGGATCTTGCAGTAAGAATCTTGAAGAAAGTTGAACCAGGGTTCGAAGATTTTGACATTTCAGGATTTAGTGTGGTTTCCAGGAATGAAAGTGAGTATATCAAGGATATAGTAGAACATGTTAATAGTTTGCTAGACAGAACATATTTATTTGTTGCTGACCATCCAGTGGGGGTAGATTCTCGTGTTCAAGATGTTATTCAACTATTGAACAGTCAAGAATCAAAAGACCCTGTACTGATTGGATTATGGGGCATGGCAGGGATTGGCAAAACAACAATTGCTAAAGCTGTTTATAATCAAATTCGTTACGATTTTGAGGGAAATAGCTTCCTCCTAAATGTCGCAAAAAATTGGAAACAATATAATGGCAAAGTTTCTCTACAACGACAACTTCTTTCTGATATCTACAAAACAAAACAAAAAATAATGATAGATACAGTTGAATCAGGAAAATTGATATTACAGGAAAGACTTTGCCAAAAGAGGATACTTCTTGTGCTCGATGATGTGAGTGAATTGGACCAATTGAATGCTTTGTGCGGAAGTCCCAAATGCTTTGGTCAAGGAAGTAAAATAATCATCACATCAAGAGATCCACATATACTTCATGCTCATTACGTTAACCATGTATACGAAATAAAATCAATAAACCAATATGAATCGCTTCAACTTTTTAGTTGGCATGCCTTCGAGAAACCAAGTCCTATGCATGATTTTTCTGATCTTTCTAGAGATTTTATTGATTACTTCAGGGGAGTGCCACTTGTTATTCAAGTCATTGGGTCCTTTTTGTTGACTAGTCGAAGCAAAACATTATGGATAAGTGTTTTGGAGAAACTCAAATGCATTCCCAACGACAATGTAATTGACAAACTGAGAATAAGTTACGATGGTTTAAGGGATAATGATATGAAAGATATATTCCTTGATATTGCCCAGTTCCTTATTGGGATGGACCTGAAAGCTGCAACTAAAATACTGAAAGACTCTGAACTTTCTGTAGATATTGGTATGAGTATCCTTGTACAACAAAACCTTGTAACTGTTGATCGGATGAACAAGATTGGAATGCATGATTTGTTAGAAGACATGGCAAGTGAGATCATAAGGAGAAAGTCAGAGAGGGTGGATAAGAAAAGGATCTATGATGTGTTCTTGAGTTTTAGAGGGGAAGACTGTCGTGCAAATTTCATTTCACATCTCTATACCTCCCTTCAAATTGCTGGGATTTATGTTTTCAAAGATGATGCTGAGATTCAACAAGGAGATCAGATCTCAGCCTCACTTTTGGAAGCAATAGGACAGTCTAGAATCTGTATCGTTGTTTTGTCTAGTAACTATGCTAATTCAAGATGGTGTATGATAGAGTTGGAGAAAATCATGGACAGAAGCAACAGTCTGGTGGTTATACCAGTGTTCTATGAGGTAGATCCTTCAGAAGTACGACATCAAACTGGCAGGTTTGGAGAAGGTTTTAAAAATCTCCTCTCAGGAATCTCAGTGAATAGTTATAGGGAGATGAAATGGAAAACAGCACTTCTTAAAGTTGGTGGCACATCAGGAGTTGTCGTCATAAACTCCAGGAATGAAAGTGAGGATATCAGGAAAATAGTAAACGATGTTACTAAGTTACTAGACATAACAGACTTATTCGTTGCTGACCATCCAGTGGGGGTAGATTCTCGTGTTCAAGATATTATTCAACTATTGAATAATCAAGAATCAAATGACCCTTTACTGCTTGGAATATTGGGCATGGGAGGAATCGGCAAAACAACAATTGCTAAAGGTGCTTATAATAAAATTCGTCACAATTTTGAGGCAAAGAGTTTCCTCTTAAATGTCAGGGAAATTTGGGAACAAGATAATGGAAAAGTTTCTCTACAGCAACGACTTCTTTCTGATATCTACAAAACAACGAAAATAAATATAGATACAGTTGAGTCGGGAAAAATGATTTTGCAGGAAAAACTTCGGCAGAAGAGGATATTTCTTGTGCTTGATGATGTGAATAAACTGGACCAATTGAATGCTTTGTGTGGAAGTCATGAATGGTTTGGCGAAGGAAGTAGAATAATCATCACTACAAGAGACGGTGATTTACTTCACGGGCTTAAGGTGGACCATGTGTATAGAATGAAAAAAATGAACGGCGATGAATCTCTTCAACTTTTTAGTTGGAATGCCTTCAAGGAACCAAGTCCTATTGATGGTTTTGCCGGCCTTTCTAGAGATTTTGTTAAGTACTGTGGGGGATTGCCGCTAGCTCTTCAAGTTATTGGGTCCTTTTTGATGACTAAGAGAAGAAAAATAGAATGGAAGAGTGTATTGGAGAAACTCAAACTCATTCCCAATGAGGAAGTGTTAGAAAAACTTCGAATAAGTTTTGACGGTTTAAATGATTATGATATGAAAGAAATATTCCTTGATATTGCTTTTTTCTTTATTGGGATGGACCAAGAAGACGTGACTAAAATATTGGAAGACTGTGGGCATTATGCAGGTATTGGAATAAGTGTCCTTGTTCAAAGAAGTCTTGTAACTGTTGATAGTAAGAACAAGATTGGAATGCATGAATTGCTACAAGACATGGGAAGAGAGATTGTCAGTAAGATATCAAGAGAGGGAAACAAGGATCCTAGTAGGTTATGGCGTTACGAGGATGTGAATTCTTTGTTGTCAAAGGATACTAGAACTTTATATGTTAAGGGACTGACATTAAAGATATCAAGAATGGACTCCACAACTTATTTGGACTCTAAAACATTTGAGAAGATGGATAAGCTTAAATTACTTCAACTTGCTGGCATAAAATTTAATGGAAATTACAAATATATTTCAAGAGAACTTAGATGGCTTTGTTGGCATGGGTTTCCTTTAAAATATACACCAACTGACTTTCATCAAGAACGTTTAGTTTCTGTTGACTTCAAATATTCCAATCTGGAACGAGTATGGAAGAAGTCCCAGTTTCTGAAGGGGCTGAAATTTCTTAATCTTAGTCATTCTCATAACTTGAGACAAACTCCAGACTTTTCAAACTTGCCAAATCTTGAAAAGTTGATACTCAAAGATTGTCCAAGTTTGTCCTCAATTTCTCCTACTATAGGACATCTCAAGAAAATTCTTTTAATAAATTTGAAAGACTGTACAGGCCTACGTGAACTTCCAAGAAGCATCTATAAATTGGAGTCACTGAAAACTCTCATTGTGTCTGGCTGTACAAAAATTGTCAAGTTGGAAGAAGATATAGAACAGATGACATCTTTGACCACCCTGGTTGCGGATAACACTGCTCTAACAAGAGTACCCTTTGCAGTAGTAAAATCAAAAAGCATTGGATATATTTCCTTGTGTGGATTCAAAGGATCCCCGCGTAATGTGTTTCCTTTAATTATTCAGTCTTGGATGTCTCCAACAAATGGTATGTTGTCCTTAGTTCAAACATTTGCAGGCACATCATCTCTTGAATTCTTTGATGAACAAGAAGATATTTTCTTTGGTCTGCCATCTATTCTTAAAGAACTTCCGAATCTTCAACGTCTTTTGTTGAAATGCGGGTCAGACACTCAACTAAATCAAACTCTAGCAAGTATTCTCGATAACTTACATACCCAAAGTTGTGAGGAGTTGGAAGCAATGCAAAACATACCACAATCCTCAAATTTTGTGGCTTTGGAATCAGCACATTATTTCAGTCAAGTTCGAATTTCAAGCTCACAAAAATCCTTGACATCACTTTTGATTCAGATGGGAATGAACTGCCATGTCACTAATACACTTAGAGAAAACATTTTACAGAAATTGCCTCCCAATGGATCTGGTTTACTCCCTAGTGACAATTATCCTGATTGGCTAGCCTTCAATGAAAAAGGTTCTTCTGTAACTTTTGAAGTACCTCAAGTGGATGAGCGTAATTTGAAAACAATCATGTGCATTGTCTATTCTTCTTCTCTAGATGACATTACATCAGAAAGTGTAGAAGACCTCAAAGTTTTGCTGCTGATAAATTTCACAAAGAAGACCATTCAGCTCTATAAGAAAGACGCGTTATTAGCCTCCTTTGATGAAGAGGAATGGCAGAAAGTAGTATCAAGTACAGAACCAGGTGACATAATGAAGCTTATTGTTGTTTTTGGAAGCAAAATCGTTGTGAAGAAGACAACAGTTTATTTTATCTATGATGAACCAATTGACGAAAAAACAAAGCACTGCCCAGAGCCAGATAAGAATATAATTATATTTGGTAGACTGTTGTTCCGACTTCCTTCCCTTGTTCAAGCCGCTCTGATTTCACGACCTTTCTGGTTCTGTTTGGCTGTTATGCTGATTTGGTGGATTCGCTTCTGTTCTAACAAACACAGAAGTTTAAGGAAATGGCTTCCCAAAGCTCTCAAGGTTTCTGCAATCCAGTATCGAGGGACGAAATTTCTTTGGGTGATGTACAACAAAATTTTAAATTGCTGTCGTCGTGGTTAA 4878 0.3692 MASSSFSSTNQDSELISDNDENLSWIYDLFLSFCDKDATKSFAYNLDTALTEAGIVVFRDGDKLRNQDQMITPSVLHAIEMSRVSIVVFSKNYADSTWCLQELEKILECYRTADQMVLPVVHDDEDMLEETFMDLAVRILKKVEPGFEDFDISGFSVVSRNESEYIKDIVEHVNSLLDRTYLFVADHPVGVDSRVQDVIQLLNSQESKDPVLIGLWGMAGIGKTTIAKAVYNQIRYDFEGNSFLLNVAKNWKQYNGKVSLQRQLLSDIYKTKQKIMIDTVESGKLILQERLCQKRILLVLDDVSELDQLNALCGSPKCFGQGSKIIITSRDPHILHAHYVNHVYEIKSINQYESLQLFSWHAFEKPSPMHDFSDLSRDFIDYFRGVPLVIQVIGSFLLTSRSKTLWISVLEKLKCIPNDNVIDKLRISYDGLRDNDMKDIFLDIAQFLIGMDLKAATKILKDSELSVDIGMSILVQQNLVTVDRMNKIGMHDLLEDMASEIIRRKSERVDKKRIYDVFLSFRGEDCRANFISHLYTSLQIAGIYVFKDDAEIQQGDQISASLLEAIGQSRICIVVLSSNYANSRWCMIELEKIMDRSNSLVVIPVFYEVDPSEVRHQTGRFGEGFKNLLSGISVNSYREMKWKTALLKVGGTSGVVVINSRNESEDIRKIVNDVTKLLDITDLFVADHPVGVDSRVQDIIQLLNNQESNDPLLLGILGMGGIGKTTIAKGAYNKIRHNFEAKSFLLNVREIWEQDNGKVSLQQRLLSDIYKTTKINIDTVESGKMILQEKLRQKRIFLVLDDVNKLDQLNALCGSHEWFGEGSRIIITTRDGDLLHGLKVDHVYRMKKMNGDESLQLFSWNAFKEPSPIDGFAGLSRDFVKYCGGLPLALQVIGSFLMTKRRKIEWKSVLEKLKLIPNEEVLEKLRISFDGLNDYDMKEIFLDIAFFFIGMDQEDVTKILEDCGHYAGIGISVLVQRSLVTVDSKNKIGMHELLQDMGREIVSKISREGNKDPSRLWRYEDVNSLLSKDTRTLYVKGLTLKISRMDSTTYLDSKTFEKMDKLKLLQLAGIKFNGNYKYISRELRWLCWHGFPLKYTPTDFHQERLVSVDFKYSNLERVWKKSQFLKGLKFLNLSHSHNLRQTPDFSNLPNLEKLILKDCPSLSSISPTIGHLKKILLINLKDCTGLRELPRSIYKLESLKTLIVSGCTKIVKLEEDIEQMTSLTTLVADNTALTRVPFAVVKSKSIGYISLCGFKGSPRNVFPLIIQSWMSPTNGMLSLVQTFAGTSSLEFFDEQEDIFFGLPSILKELPNLQRLLLKCGSDTQLNQTLASILDNLHTQSCEELEAMQNIPQSSNFVALESAHYFSQVRISSSQKSLTSLLIQMGMNCHVTNTLRENILQKLPPNGSGLLPSDNYPDWLAFNEKGSSVTFEVPQVDERNLKTIMCIVYSSSLDDITSESVEDLKVLLLINFTKKTIQLYKKDALLASFDEEEWQKVVSSTEPGDIMKLIVVFGSKIVVKKTTVYFIYDEPIDEKTKHCPEPDKNIIIFGRLLFRLPSLVQAALISRPFWFCLAVMLIWWIRFCSNKHRSLRKWLPKALKVSAIQYRGTKFLWVMYNKILNCCRRG 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00057 1625 PRINTS Disease resistance protein signature 713 728 - -
Vivi34g00057 1625 PRINTS Disease resistance protein signature 883 897 - -
Vivi34g00057 1625 PRINTS Disease resistance protein signature 1146 1162 - -
Vivi34g00057 1625 PRINTS Disease resistance protein signature 790 804 - -
Vivi34g00057 1625 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
Vivi34g00057 1625 Pfam NB-ARC domain 694 914 IPR002182 GO:0043531
Vivi34g00057 1625 SUPERFAMILY "Winged helix" DNA-binding domain 420 512 IPR036390 -
Vivi34g00057 1625 Gene3D Ribonuclease Inhibitor 1034 1263 IPR032675 -
Vivi34g00057 1625 Gene3D - 848 933 IPR042197 -
Vivi34g00057 1625 Gene3D - 348 433 IPR042197 -
Vivi34g00057 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 444 IPR027417 -
Vivi34g00057 1625 Gene3D - 512 683 IPR035897 -
Vivi34g00057 1625 Pfam TIR domain 515 676 IPR000157 GO:0007165
Vivi34g00057 1625 Pfam TIR domain 27 123 IPR000157 GO:0007165
Vivi34g00057 1625 ProSiteProfiles TIR domain profile. 513 678 IPR000157 GO:0007165
Vivi34g00057 1625 SUPERFAMILY L domain-like 1045 1393 - -
Vivi34g00057 1625 ProSiteProfiles TIR domain profile. 25 177 IPR000157 GO:0007165
Vivi34g00057 1625 SUPERFAMILY Toll/Interleukin receptor TIR domain 506 654 IPR035897 -
Vivi34g00057 1625 SMART till_3 26 176 IPR000157 GO:0007165
Vivi34g00057 1625 SMART till_3 514 652 IPR000157 GO:0007165
Vivi34g00057 1625 FunFam Disease resistance protein (TIR-NBS-LRR class) 511 680 - -
Vivi34g00057 1625 Gene3D - 685 843 IPR027417 -
Vivi34g00057 1625 SMART AAA_5 209 350 IPR003593 GO:0016887
Vivi34g00057 1625 SMART AAA_5 710 850 IPR003593 GO:0016887
Vivi34g00057 1625 Gene3D - 180 343 IPR027417 -
Vivi34g00057 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 679 944 IPR027417 -
Vivi34g00057 1625 SUPERFAMILY "Winged helix" DNA-binding domain 920 1026 IPR036390 -
Vivi34g00057 1625 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 137 IPR035897 -
Vivi34g00057 1625 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 515 1360 IPR044974 GO:0006952
Vivi34g00057 1625 Gene3D - 21 179 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00057 27 545 WRKY Transcription Factor Family AT4G12020 25.603 1.23e-34 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00057 - - tpra:123891787 2133.61