Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00051 ATGTCTTCGAGTTCAAAGCATAACAGTAGTAGTAAAAAGAAGCAATCAAAATCACAATCAAGGTTATCATCATCTTCAATTTCCGAGCCGGCCACTCCACCCCGCACCATAGCCGACCCACAGCAGCTCGCCTCTCTACGCCAAGAAGCTTCTCGAATCTTCCCATCCTTCATTTCAGAATCTGCTTTGGTTGGCGAAATCACCGATGTTGAGTCTACCGATTCCCTCTCCAAAGGCTCTAAAATTTGGCTTTCCGAGTCTTCTATGGTGGCATCTTCTGTTGCTCCGGGTTCACTTGTTTCGGTGTCTATTCCCGCTTCAAGTAAAGAGATTATGCAATTGCATAACTTTCCTCTCACGTCATTGACCACTGAATGTGTTAGATACTACGGATTGGAAACTTGCAACACATTCAATCATGTTGCAGGAAACTACTTTGCTCTTGCAACTGTGTTTCCTTCTAAGAAGGTATTGAAGAGTGGAGTACGTCTGTCTTCTAATCTTTCCATTGTCATGGGATGTCCTCCTTTGGGCATAAGTGTGTTTGTTCACCCATTACAGAAACAATACACATCTTGTATTGCAAATGGAAGCAATGGACTGCATTCTGGAGAAAAAGTGTATAATTGCAAGGAGTTATATCTTCAATTAGCTCCTTGTATGAGTGGACTACCACTGAAAGTCAATAATTTTCTCCCATTAGACGTGTCTAAGTCAAAATCCCGTGCCCAATCTGACAATGATATTGTTGCATCTCCTAAAACACCTTCTTATGGATCAAAGTTTTCTAATGGAACTGTGTATTCTTCCCCCGTATTTGAAGATTCAGCATCAAGTGTAACAAATTACAATGGTCAATCGGTGACTTCATTTGATGTTAGCAAGGCATTAGGAGATGAAAGTTCCAAAAAACTTCTAGAAACATGTGCAACTTCATGGTTATACTCTCGTTGTTTATTGCTGGGGAATCTTGTCAGTGTCCCATTGTTTTCCGAGTTTTGCATTTTCCAAGTGGTGGGAATTAAAAAGGTGCCGGCTACCACACCTGAGTATTGTTCATTGAATGGGAGCATTAATTTAAATCTTGAGGATTCTGATTTTGTAGAGAATGGAAATCTGGCTTTCACTGTCAATTGGGAAACAAAGGTATTTTTATCTTTGCCATCAAATGAAGCATTTGAAGAGTCAGTTCTAAGGGATTTATCGTGTCTGAAACTTGATCACAAGGCTGTTAAACCTAGCATACATGATAATATTTCTAAATTAGGTGGTTTATCTAAAGAAGAAATGCTTTTAAAGGAAACAATTTCTTTTTTAGGGAACGATACTTTATCAAGATTTGGTATGCATAATACTAAAGGAGTCCTTCTTCATGGCCCACCTGGTACAGGAAAGACTTCTCTGGCTCAATTATGTGCTCATGATGCTGGGGTCAGATTTTTCTCAATCAATGGACCCGAAATTGTTACCTCGAATTACGGGGAAAGTGAGAAAGCATTGCAAGACGTTTTTGATTCAGCTATTCAAGCTGCACCTGCCGTGGTATTTATAGATGAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGTGGTGATGAGCTATCTAACAGATTGGTTGGAACATTATTGCTTTTGATGGATGGAATTAGAAGAAATGAAGGGTTACTTGTAATTGCTGCTACTAATAGGCTTGACCATATTGATCCAGCTCTCAGACGACCTGGGAGATTCGGCGTGGAAATTGAAATCGGTGTGCCATCACAGACGCAGCGAAGAGATATTTTGCGCACTATTCTCTGTGAAATAGATCACTCTCTTTCGGAGACACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGGGGCTGATTTAGTCGGCCTTCGAGATTGGGCAACTTTTATACGTCTACGGCGTTATTTTGAACTTAAACATAAAGAGACTTGCAATGATAGTTATGATGATATAATAGAGCAATCCACTCCGTTGAATACTGCAACAAACTCCAGAGACCATTCAGGTATTGGAACTTCTGAAATTATTGATAAGACACCCGAAGAAGAGCCTATTTTGAACGTGACTTTTGAGGATTTTCAGAAGGCTAGGTCTGAAATAAGACCTAGTGCCATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAATTGGGAAGATGTTGGTGGCCAGAAGGAGGTCAAAAATCAAGTGTTGGAAGCAGTATTATGGCCCCAAAAGCACCATGATGCATTCACCCGTATTGGGACTGATCCTCCAACAGCTATATTGCTGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGGTTGAACTTTCTAGCAGTCAAGGGTCCCGAACTCTTCAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTTAAATCAATTTTTGAGAAAGCAAGGGCCAATGCCCCATCAATTGTGTTTTTTGATGAAATAGATAGTCTTGCTATAACCCGTGGGAAAGATGGTGAGAGTGTTTCAGTGTCTGATAGAGTCATGGCTCAACTTCTTGTTCAATTGGATGGTGTGCGTAAAAGAGGTGATGTTACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCTCTCTTAAGACAAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCAAATGAGGTTGACAGAGAAGAGATATTTAGCATTCATTTGCGCAAAACACCGCATGATTCTGATGTTAGCATGAAAGAACTGGCTCAACTGACAGACGGTTTTACTGGGGCTGATATATCACTTGTATGTCGAGAAGCAGCTCTTGCTGCATTGGAGGAAAACTTTGATGCTTCCGTTGTAAAAATGAAGCACTTTAAGATAGCAATCGAACAGGTTCAGCCAACAGAAGTTCAGTCCTACCAAAAGCTATCAGAAAAATTTCAAAGGGCCGTGTTCTCTCCTGTGATATAA 2973 0.412 MSSSSKHNSSSKKKQSKSQSRLSSSSISEPATPPRTIADPQQLASLRQEASRIFPSFISESALVGEITDVESTDSLSKGSKIWLSESSMVASSVAPGSLVSVSIPASSKEIMQLHNFPLTSLTTECVRYYGLETCNTFNHVAGNYFALATVFPSKKVLKSGVRLSSNLSIVMGCPPLGISVFVHPLQKQYTSCIANGSNGLHSGEKVYNCKELYLQLAPCMSGLPLKVNNFLPLDVSKSKSRAQSDNDIVASPKTPSYGSKFSNGTVYSSPVFEDSASSVTNYNGQSVTSFDVSKALGDESSKKLLETCATSWLYSRCLLLGNLVSVPLFSEFCIFQVVGIKKVPATTPEYCSLNGSINLNLEDSDFVENGNLAFTVNWETKVFLSLPSNEAFEESVLRDLSCLKLDHKAVKPSIHDNISKLGGLSKEEMLLKETISFLGNDTLSRFGMHNTKGVLLHGPPGTGKTSLAQLCAHDAGVRFFSINGPEIVTSNYGESEKALQDVFDSAIQAAPAVVFIDEIDAIAPPRKDGGDELSNRLVGTLLLLMDGIRRNEGLLVIAATNRLDHIDPALRRPGRFGVEIEIGVPSQTQRRDILRTILCEIDHSLSETQIEELASITHGFVGADLVGLRDWATFIRLRRYFELKHKETCNDSYDDIIEQSTPLNTATNSRDHSGIGTSEIIDKTPEEEPILNVTFEDFQKARSEIRPSAMREVTLEVPKVNWEDVGGQKEVKNQVLEAVLWPQKHHDAFTRIGTDPPTAILLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVKSIFEKARANAPSIVFFDEIDSLAITRGKDGESVSVSDRVMAQLLVQLDGVRKRGDVTVIAATNRPDKIDPALLRQGRFDRLLYVGPPNEVDREEIFSIHLRKTPHDSDVSMKELAQLTDGFTGADISLVCREAALAALEENFDASVVKMKHFKIAIEQVQPTEVQSYQKLSEKFQRAVFSPVI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00051 990 Gene3D - 586 708 - -
Vivi34g00051 990 FunFam Putative vesicular transport protein (CDC48) 406 584 - -
Vivi34g00051 990 Gene3D - 894 964 - -
Vivi34g00051 990 MobiDBLite consensus disorder prediction 1 32 - -
Vivi34g00051 990 SMART AAA_5 757 895 IPR003593 GO:0016887
Vivi34g00051 990 SMART AAA_5 451 587 IPR003593 GO:0016887
Vivi34g00051 990 FunFam spermatogenesis-associated protein 5-like protein 1 894 977 - -
Vivi34g00051 990 ProSitePatterns AAA-protein family signature. 555 573 IPR003960 GO:0005524|GO:0016887
Vivi34g00051 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 719 974 IPR027417 -
Vivi34g00051 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 712 IPR027417 -
Vivi34g00051 990 PANTHER AAA-FAMILY ATPASE 575 982 - -
Vivi34g00051 990 Pfam AAA+ lid domain 915 960 IPR041569 -
Vivi34g00051 990 CDD RecA-like_CDC48_r2-like 732 891 - -
Vivi34g00051 990 MobiDBLite consensus disorder prediction 1 38 - -
Vivi34g00051 990 Pfam ATPase family associated with various cellular activities (AAA) 761 892 IPR003959 GO:0005524|GO:0016887
Vivi34g00051 990 Pfam ATPase family associated with various cellular activities (AAA) 455 584 IPR003959 GO:0005524|GO:0016887
Vivi34g00051 990 Gene3D - 405 584 IPR027417 -
Vivi34g00051 990 FunFam calmodulin-interacting protein 111 isoform X1 718 893 - -
Vivi34g00051 990 Gene3D - 718 969 IPR027417 -
Vivi34g00051 990 ProSitePatterns AAA-protein family signature. 863 881 IPR003960 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00051 11 987 Calmodulin-binding Proteins AT3G56690 51.834 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00051 - - psat:127126471 1819.67