Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00050 ATGGCTTCAAGACCCATTGTTCCTCAACAACAACAAAGAGGTGATGCTGTTGTGGGGGGAGGAAAACAGCAGAAGAAGAACGTTGCAGGAGGAGAAGGAAGGAACCGTAGAGCAGCACTTCTTGATATTGGTAATGTGGTCACTGCGGTAAGAGGTGTTGAAGTCAAGCCGAATCGTCCCATCACAAGGAATTTCTGTGCACAACTACTTGCCAATGCTCAAGCAGCAGCTGCTGCTGATAATAACAAGGTCTGTGCTAATGTGGCACCTGGACCTGTTCCTCCTCATGCTGCTGCTAAGGGTGTTCCAGTGGCTAAAAGAGTCGCAGTGGCCCCTAAACCTGTTCAGAAGAAAGTTACTGCAAAACCAAAGCCTGTGGAAGTAGTTGATATAGTAAGTTCTGAAGAAGAAAATAGCAGTAAAGAAAAGTCTGTGCACAACAAAAAGGATGGAGAGGTTAATTCCAGGAAGAAATCATCACGCACTCTTACTTCTGTTCTCACAGCTAGAAGCAAGGCTGCATGTGGTTTGACTAACAAACCTAAGGAGATTGTTGACATTGATGCTGCTGATGTTAACAATGAACTTGCTGCTGTTGAATATCTGGATGACATTTACAAGTTCTACAAGTTAGTTGAGAATGAGAGCCGTCCACATGATTACATGGACTCACAACCTGAGATTAACGAAAAGATGAGAGCTATACTCATTGATTGGCTGGTAGATGTTCACACAAAATTCGAACTTTCACCTGAAGCCCTTTACCTCACAATCAACATAGTTGATAGATTCTTAGCTATCTGCCTTGTGTCAAGAAGGGAACTTCAATTGGTTGGCGTCAGTGCCATGTTGATGGCATCGAAGTACGAGGAAATCTGGCCACCCGAGGTCAATGACTTTGTGTGCCTCTCAGATAGAGCTTACACTCATGAACAGATACTCATCATGGAGAAGACCATCCTAGGGAAGCTTGAATGGACACTGACAGTTCCTACACCATTTGTTTTCTTAGTCCGATTCATCAAGGCGGCTTCAGTATCGCTATCTCCTTTTGATCAACAGGTTTTCGAGAACATGGCTCATTTTCTTTCTGAGCTGGGAATGCAGCATTATGCTACCTTGATGTACAGTCCTTCAATGATGGCTGCAGCAGCTGTTTATGCAGCAAGGTGCACATTGAATAAGAGTCCTGCTTGGGACGAAACACTTAAGGTGCACACTGGTTACTCAGAAGAAGAATTGATGGGTTGTGCTAGATTGTTGGTGAGTTTTCACACTGGTATTGCGACTGCAAAGCTGAAGGTCTTGTACAAAAAGTACTGTGATCCTCAGAGAGGTGCTGTTGCTGCACTTCCACCGGCCAAGAACCTTATATCTGCTGCAGTAGGTTCTTCTTAG 1398 0.4435 MASRPIVPQQQQRGDAVVGGGKQQKKNVAGGEGRNRRAALLDIGNVVTAVRGVEVKPNRPITRNFCAQLLANAQAAAAADNNKVCANVAPGPVPPHAAAKGVPVAKRVAVAPKPVQKKVTAKPKPVEVVDIVSSEEENSSKEKSVHNKKDGEVNSRKKSSRTLTSVLTARSKAACGLTNKPKEIVDIDAADVNNELAAVEYLDDIYKFYKLVENESRPHDYMDSQPEINEKMRAILIDWLVDVHTKFELSPEALYLTINIVDRFLAICLVSRRELQLVGVSAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVSLSPFDQQVFENMAHFLSELGMQHYATLMYSPSMMAAAAVYAARCTLNKSPAWDETLKVHTGYSEEELMGCARLLVSFHTGIATAKLKVLYKKYCDPQRGAVAALPPAKNLISAAVGSS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00050 465 MobiDBLite consensus disorder prediction 132 162 - -
Vivi34g00050 465 Gene3D - 204 450 - -
Vivi34g00050 465 MobiDBLite consensus disorder prediction 132 157 - -
Vivi34g00050 465 PIRSF Cyclin_A_B_D_E 1 465 IPR046965 GO:0016538|GO:0044772
Vivi34g00050 465 MobiDBLite consensus disorder prediction 1 32 - -
Vivi34g00050 465 Pfam Cyclin, N-terminal domain 204 328 IPR006671 -
Vivi34g00050 465 ProSitePatterns Cyclins signature. 233 264 IPR006671 -
Vivi34g00050 465 Pfam Cyclin, C-terminal domain 331 453 IPR004367 -
Vivi34g00050 465 SUPERFAMILY Cyclin-like 330 455 IPR036915 -
Vivi34g00050 465 CDD CYCLIN_AtCycB-like_rpt1 184 326 - -
Vivi34g00050 465 Gene3D - 218 329 - -
Vivi34g00050 465 PANTHER CYCLINS 140 440 IPR039361 -
Vivi34g00050 465 FunFam G2/mitotic-specific cyclin-1 319 449 - -
Vivi34g00050 465 SMART Cyclin_C_2 331 454 IPR004367 -
Vivi34g00050 465 SMART cyclin_7 238 322 IPR013763 -
Vivi34g00050 465 SMART cyclin_7 335 423 IPR013763 -
Vivi34g00050 465 SUPERFAMILY Cyclin-like 193 328 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00050 1 461 Core Cell Cycle Gene Families AT4G37490 51.709 2.30e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00050 K21777 - gmx:547919 563.918