Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00040 ATGGCATCTAGTTCAATGTCAGCTTCTGGCTCATGGAGTGTTAAGGACAACAAAGCCTTTGAAAGAGCTCTAGCTGTTTATGACAAAGACACACCAGATCGTTGGTACAATGTAGCTCATGCTGTTGGTGGAAAAACTCCTGAGGAAGTTAAGAAACACTATGAACTTCTTGTTGAAGATGTTAAGCATATTGAGTCAGGGAAAGTTCCATACCCAAATTACAAGAAAATTTCAGGCTCTCAAGAAGAGAAAAGGATGAGGAACCTGAGCCTTCATTGA 279 0.405 MASSSMSASGSWSVKDNKAFERALAVYDKDTPDRWYNVAHAVGGKTPEEVKKHYELLVEDVKHIESGKVPYPNYKKISGSQEEKRMRNLSLH 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00040 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Vivi34g00040 92 CDD SANT 18 58 IPR001005 -
Vivi34g00040 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Vivi34g00040 92 SMART sant 8 60 IPR001005 -
Vivi34g00040 92 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Vivi34g00040 92 FunFam Transcription factor SRM1 4 71 - -
Vivi34g00040 92 Gene3D - 2 71 - -
Vivi34g00040 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Vivi34g00040 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi34g00040 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00040 - - gmx:100818368 163.696