Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00035 ATGGTGGAGAGAAGAAAGCCTCTGGTTCTGTGTTCCACCAAAAATGTCATCAATTCCTTATTGAACTCTTCAACTTCTTCAATCAATGAATTCCCCAATTTGCATTTACCGGTTGGAATTCTCCGATTATCCAACAAATTGCCTTCTCTTGATCACTCTGCACTCATTGCTCTATCCACTTCTCTTCTCAAAAGACTTTCCATCACTTCTGGTTCACCGGTTTTGATAAAAAATGCTGAAATGAACACGCAGAGGATTGCAGTGGCTATTGCTCTTGACCCTCCTAGCAATGACATTGACACCCTTGATATTGATCACTCATTATCCGTTTCTTCTAGAATAATGCTTGTTTTTCCTTCTTGTGATTTTCCTCTCAATGCCCCTTTGTTAAATGGCGAAGTTGCTTATTTGTCTCCTCTTTTGGCCTTTAATCTTAACTTGCACATTTCATGTTTGAAATCGGTTATTCACCATGGCCAAGATGCTTTATCGTCTTATTTCAAATCTCAATGTCAAGTGGGTGATGAGGATGCCGATAAAAGCATTGAGGATTCGGTCATTAATATAGAGTTGGTGCCACTCGCTCAACCTCCGAGATTTGCCTCCCTTTTGAGGGTTGCTTTTGTGAAGATACCAGAATGTGGTATCCTTGATTCCATTAAACCAACTTCAGAGGTTGAAGCCAAAGAACGTCAAGACCTGATTGACTTGGCATTGCAGAAGTACTTTGAAGTCGATAGATATTTGTCAAGCGGAGATGTTTTCGGAATTAGCATTAGTTGGAACTGTAATTCCACTATTTGCATTCCTTGTAACCAAAACACACAAAAGCAAAATGACAACCGTATCTGTTTTAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTCCGTGTCAATAAAACCTTAACTGCGTTGGTGTTAGGAGGGAATTCCCCATCTGCCCTTCCTCCAGATTTGTTAATTGCTGGACCAGAAGGGCCCGTGCCCTTGCAAAGAGACACAGTGAAGATCTTGGCTTCAATACTCGCACCAACTTTATGTCCATCAGCACTCTCTTCCAAGTTTAGAGTTTCAGTGTTATTATATGGCTTGGCAGGTTGTGGGAAAAGGACCGTTGTTAGATATGTTGCTCGTCGACTGGGCCTGCATGTGGTCGAATATAACTGTCACGATCTAATGGGTTCCGATAGAGCATCTGTTGCTCTAGCTCAAGCTTTCAAGACTGCTCAAAGATACTCGCCAACAATACTTCTTCTTCGTCATTTTGAGGTATTTCGAGATTCACATTCACCTGAGATTTCACCAAATGATCAAAGAGGCAATGCATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAGTTGGTGAACATGATGATAGTAATTCTCTGATGAAATCAAATGGCGAATTTGTGGACAAGAATTCTGAAAAGACAAGCGGGCATCAGGTCCTGTTGATTGCTGCAGCTGACAGTTCAGAGGGTCTACCTTCAACCATCAGACGCTGCTTTAGCCATGAAACAAACATGGGGACTTTGACAGAAGAGCAAAGGGCAGAAATGCTATTGCATTCACTGCAAAATATTTATGGACTCCACTCTAATACTGATTTAGAGGGTTTTGTAAAAGAATTAGTTGGACAGACATCTGGTTTCATGCCCAGAGATATGTGTGCTTTAATTGCAGATGCTGGTGCCAACTTATTTCCCAGCAGCGATGCTGAAGCAGACAAAGTTGAACCTGAAGGTGCAGATAGTTCTCTTAGTTCAAAGGTAACAGAGGACAACAACGAGTCTGAAGTTTCAGCTCGAAAACCTGGGAAAGAAGACTTGGTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCGTCAGCATTGGGTACTCCAAAGGTTCCAAATGTAAAATGGGACGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCTTGCATAAAGATCTTTTTGCATCTGGGTTACGCAAACGGTCTGGTGTTCTTTTGTATGGTCCTCCTGGAACTGGAAAAACATTATTAGCAAAAGCAGTTGCTACAGAGTGTTCCTTAAATTTTCTTAGTGTGAAGGGTCCTGAACTGATCAACATGTACATAGGCGAGTCTGAGAAAAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCCCGACCGTGTGTCATCTTCTTTGATGAGCTTGACTCTCTTGCACCAGCTCGGGGAGCTTCTGGAGATTCTGGGGGTGTTATGGATAGAGTGGTTTCGCAGATGCTTGCAGAAATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTCTTCGCCCTGGTCGTTTTGATAAATTGCTATATGTTGGCGTTAACTCTGATGCATCTTACAGAGAGCGGGTACTAAAAGCTCTTACGAGAAAGTTTAAATTGCATGAAGATGTTTCACTTTACTCCATTGCAAAAAAATGTCCACCAAACTTCACCGGCGCAGACATGTATGCCTTGTGTGCAGATGCTTGGTTCCGCGCTGCAAAACGCAAAGTTTTGAATGCAGATCCAGACTCCTCAACCCCAGATAATGAAGCAAATTCTATTGTTGTTGAATATGATGATTTTGTCCAGGTCTTAGAAGAGCTTCAGCCTTCCCTCTCAACGGCCGAGCTTAAGAAGTACGAGCTTCTTAGAGATCAATTTGAAGGCACCTCTAAATGA 2769 0.4196 MVERRKPLVLCSTKNVINSLLNSSTSSINEFPNLHLPVGILRLSNKLPSLDHSALIALSTSLLKRLSITSGSPVLIKNAEMNTQRIAVAIALDPPSNDIDTLDIDHSLSVSSRIMLVFPSCDFPLNAPLLNGEVAYLSPLLAFNLNLHISCLKSVIHHGQDALSSYFKSQCQVGDEDADKSIEDSVINIELVPLAQPPRFASLLRVAFVKIPECGILDSIKPTSEVEAKERQDLIDLALQKYFEVDRYLSSGDVFGISISWNCNSTICIPCNQNTQKQNDNRICFKVIAMEPSDEPVLRVNKTLTALVLGGNSPSALPPDLLIAGPEGPVPLQRDTVKILASILAPTLCPSALSSKFRVSVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMGSDRASVALAQAFKTAQRYSPTILLLRHFEVFRDSHSPEISPNDQRGNASEVASVIRKFTEPVGEHDDSNSLMKSNGEFVDKNSEKTSGHQVLLIAAADSSEGLPSTIRRCFSHETNMGTLTEEQRAEMLLHSLQNIYGLHSNTDLEGFVKELVGQTSGFMPRDMCALIADAGANLFPSSDAEADKVEPEGADSSLSSKVTEDNNESEVSARKPGKEDLVNALERSKKRNASALGTPKVPNVKWDDVGGLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFRAAKRKVLNADPDSSTPDNEANSIVVEYDDFVQVLEELQPSLSTAELKKYELLRDQFEGTSK 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00035 922 FunFam Peroxisome biogenesis protein 6 810 896 - -
Vivi34g00035 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 570 IPR027417 -
Vivi34g00035 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 916 IPR027417 -
Vivi34g00035 922 ProSitePatterns AAA-protein family signature. 779 797 IPR003960 GO:0005524|GO:0016887
Vivi34g00035 922 Gene3D - 634 911 IPR027417 -
Vivi34g00035 922 SMART AAA_5 672 812 IPR003593 GO:0016887
Vivi34g00035 922 SMART AAA_5 357 517 IPR003593 GO:0016887
Vivi34g00035 922 FunFam Peroxisomal biogenesis factor 6 634 823 - -
Vivi34g00035 922 Pfam ATPase family associated with various cellular activities (AAA) 676 808 IPR003959 GO:0005524|GO:0016887
Vivi34g00035 922 Pfam ATPase family associated with various cellular activities (AAA) 361 511 IPR003959 GO:0005524|GO:0016887
Vivi34g00035 922 FunFam Peroxisome biogenesis protein 6 330 514 - -
Vivi34g00035 922 Gene3D - 810 896 - -
Vivi34g00035 922 CDD AAA 351 421 - -
Vivi34g00035 922 Gene3D - 330 535 IPR027417 -
Vivi34g00035 922 PANTHER AAA-FAMILY ATPASE 47 919 - -
Vivi34g00035 922 CDD RecA-like_PEX6_r2 648 807 IPR047533 -
Vivi34g00035 922 MobiDBLite consensus disorder prediction 577 613 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00035 642 881 Calmodulin-binding Proteins AT3G56690 38.589 5.89e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00035 K13339 - gmx:100820183 1447.18