Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00025 ATGGGACTCTGTCATGGAAAACCCCTTGAACCTTCACATACAGAACGACAAATTTCAACCTCCGCAAACGATGAAATTCTCCAACTTCCACCACCAACACCACTAACACCCACAATTCATCATGCATCAACTAAATCATCATCAAAATTCCCCTTTTTCAGTCCTAGTCCTTTACCCAGCTTCTTCAAACACTCACCAGCTCATTCTAATTCTAATTCCAATTCGAATAGTGTCAGTTCGACTCCTCTTCGGATCTTTAAGCGGCCCTTTCCGCCACCGTCTCCGGCCAAGCACATTCGGGCTCTGCTTGCGAAAAGACATGGCTCTGTGAAGCCGAATGAGGCTACGATACCGGAAGGGAGTGAGTGTGAAGTTGGGTTGGATAAGAGTTTTGGGTTTTCGAAGCAGTTTGGGGTTAATTTTGAGATTGGTCAAGAAGTGGGGCGTGGGCATTTTGGGTATACTTGTTTTGCTAAGGGGAGAAAAGGAAGCTTTAAGGGGATTGATGTTGCTGTTAAAGTCATTCCTAAATCTAAGATGACGACGGCAATTGCTATAGAAGATGTGAGAAGAGAAGTGAAGATATTGCGAGCTCTGACCGGTCATCCGAATCTGGTACAATTCTATGAAGCCTATGAAGACGATGAAAATGTTTATGTAGTTATGGAATTATGCAAAGGAGGTGAATTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGACGCTAGAGTTGTGTTGATTCAGATATTAAGTGTGGTAGCTTACTGTCATCTACAAGGCGTTGTCCACCGTGATCTCAAGCCAGAGAATTTTCTTTTTAGTTCTGAGGATGAAAATTCGACACTGAAGGCAATTGACTTTGGACTCTCTGACTATGTAAAGCCAGATGAGAGATTGAATGATATTGTTGGAAGTGCATATTACGTTGCCCCTGAAGTTTTGCACAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATCCTGTTATGCGGAAGCCGACCTTTTTGGGCCAGGACAGAATCTGGCATATTTCGGACTGTACTTAAGGCAGATCCAAGTTTTGACGAAGCTCCTTGGCCTTCTTTATCGGCTGATGCAAAAGATTTTGTAAAGAGGCTGCTGAATAAAGATTTTCGTAAAAGATTAACTGCGTCTCAGGCTCTCAGTCATCCATGGCTGGTAAATCACTTAGAGGATAGAAAGATTCCGTTTGATATGATAATCCACAAGAACGTCAAAGCATACATAGGCTCATCTTCTTTACGTAAATCAGCGTTAGGGGCTGTTGCAAAGACATTGACATTAGTGCAGCTAGCATATCTCAAAGAACAATTTACTATTTTAGGGCCAAACAAAAGTGGGCTCATCTCTATGCAGAACTTCAAGACGGCTATTTTAAGGAGCGCCACTGATGCCTCGAAGGATTCACGGGTCTTAGATTATGTGAACATGATTAGCTCAATCCAATATCGAAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTGGAGGGAATGGAAGTTTGGGAGCGACATGCAAGACGTGCCTACGATCTTTTTGAGAAGGATGGAAATAGACCTATCATGATTGAAGAGCTTGCCTCGGAACTTGGACTTGGCCCCTCGGTACCTATTCATACGGTACTCCAAGATTGGATAAAACACTTTGACGGAAAGCTTAGTTTCTTAGGGTTTGTCAGACTCCTGCACGGAGTTTCAACTCGCGGACTTCACAAGGCTTGA 1788 0.429 MGLCHGKPLEPSHTERQISTSANDEILQLPPPTPLTPTIHHASTKSSSKFPFFSPSPLPSFFKHSPAHSNSNSNSNSVSSTPLRIFKRPFPPPSPAKHIRALLAKRHGSVKPNEATIPEGSECEVGLDKSFGFSKQFGVNFEIGQEVGRGHFGYTCFAKGRKGSFKGIDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHPNLVQFYEAYEDDENVYVVMELCKGGELLDKILSRGGKYSEEDARVVLIQILSVVAYCHLQGVVHRDLKPENFLFSSEDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSADAKDFVKRLLNKDFRKRLTASQALSHPWLVNHLEDRKIPFDMIIHKNVKAYIGSSSLRKSALGAVAKTLTLVQLAYLKEQFTILGPNKSGLISMQNFKTAILRSATDASKDSRVLDYVNMISSIQYRKLDFEEFCAAAISVHQLEGMEVWERHARRAYDLFEKDGNRPIMIEELASELGLGPSVPIHTVLQDWIKHFDGKLSFLGFVRLLHGVSTRGLHKA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00025 595 MobiDBLite consensus disorder prediction 1 43 - -
Vivi34g00025 595 SUPERFAMILY EF-hand 433 586 IPR011992 -
Vivi34g00025 595 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Vivi34g00025 595 CDD STKc_CAMK 140 402 - -
Vivi34g00025 595 MobiDBLite consensus disorder prediction 64 90 - -
Vivi34g00025 595 FunFam Calcium-dependent protein kinase SK5 313 407 - -
Vivi34g00025 595 FunFam CDPK-related kinase 3 133 305 - -
Vivi34g00025 595 Gene3D - 425 583 - -
Vivi34g00025 595 FunFam CDPK-related kinase 1 134 229 - -
Vivi34g00025 595 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi34g00025 595 FunFam CDPK-related kinase 1 441 513 - -
Vivi34g00025 595 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi34g00025 595 Gene3D Phosphorylase Kinase; domain 1 143 230 - -
Vivi34g00025 595 SUPERFAMILY Protein kinase-like (PK-like) 140 418 IPR011009 -
Vivi34g00025 595 Gene3D - 444 513 - -
Vivi34g00025 595 Gene3D Transferase(Phosphotransferase) domain 1 231 424 - -
Vivi34g00025 595 MobiDBLite consensus disorder prediction 64 83 - -
Vivi34g00025 595 MobiDBLite consensus disorder prediction 13 27 - -
Vivi34g00025 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Vivi34g00025 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 129 564 - -
Vivi34g00025 595 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00025 38 592 EF-hand Containing Proteins AT3G50530 67.458 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi34g00025 Pkinase 5.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00025 K13412 - gmx:100783262 967.607