Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00015 ATGGGCAGTAGGGGAAGAATTGCTGAGGATACTAACAAAATTGCCAACGGGATGCCGAGTTACGCGCCTCCATTGCCGCCGCCTAATTCCATGGGCATGGAAGGAACTAATATTCATCCTTCTCGAATTTCTGATTTTGGAGCCCTTGAACAGTCTCTAGGATTTCGTGTTGAGGATGCCATGAATCTTAGCAGAAATCCAGTGTTTAATCAAATGAAAGCAAATAGCCAAGCTTTAGGTGCTGATATTCAATTTGGTGCTCTAAGTAAGTCAATTGCAAACTCGGATATAAATCTCTCTGCTGCCATTGCTGGATCTCAGACATTGCAACAACAAAAAGACTTGCAGCCGAATTTGGCTTCAACATCTGGCGGCCATCGCGAGAATTGGGGAGAGTCCAACATGGGTGATGGAAGCCCTGATACTTCAACAGATGATACAGAAGACAAGAATCAAATGGCTGAAAGAGGAGAATCAAGTGAAAGATCAAAAGATAAATCAGATCAAAAGACGTTAAGACGGTTAGCTCAAAATCGCGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTGGAGCAAGAACTACAGCGAGCACGCCAGCAGGGGATTTTTATTTCAAGCACTGGAGAGCAGACTCATTCACTGAGTGGAAATGGCGCGATGGCATTTGATGCAGAATATGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAACTAAGGGCTGCGATAAATTCTCATGCGGGGGACATTGAACTCCGTACCATTGTGGAAAATTTCATGACTCAATTTGAAGATATCTACAGGCTGAAAGGTGTTGCAGCAAAAGCCGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGTCATCCGAAATTCTTAAGGTGAGAGATTTCTCATTTGTCTATTCTCCATTGGTCTATAATATTCTATCATTTTTCTTTCTTTTTCTCACGTCATGCCGATCTCAACCTGGATTTCCATCCTTGCAGCTTCTTGTAAGTCATTTGGAGCCTTTAACCGAGCAACAATTAATGGGCATCTACAACTTGCAACAGTCATCCCAACAGGCCGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTTTCCGAGACTTTGGCTAATGGTTCACCTAACCCATCAGGCTCTTCTGGAAATGTGGCTAACTACATGGGCCAAATGGCCATGGCCATGGGAAAGCTCGGTACACTTGAGGGCTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTGCAACAAATGCTTCGAATATTAACAACCAGACAATCAGCTCGAGCTCTTCTTGCAATAAGCGATTATTTCTCCCGGCTGCGAGCCTTGAGTTCTCTATGGCTTGCGCGGCCAAGGGAGTAA 1476 0.4478 MGSRGRIAEDTNKIANGMPSYAPPLPPPNSMGMEGTNIHPSRISDFGALEQSLGFRVEDAMNLSRNPVFNQMKANSQALGADIQFGALSKSIANSDINLSAAIAGSQTLQQQKDLQPNLASTSGGHRENWGESNMGDGSPDTSTDDTEDKNQMAERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSLSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVENFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKVRDFSFVYSPLVYNILSFFFLFLTSCRSQPGFPSLQLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00015 491 Coils Coil 189 216 - -
Vivi34g00015 491 ProSiteProfiles DOG1 domain profile. 235 488 IPR025422 GO:0006351|GO:0043565
Vivi34g00015 491 MobiDBLite consensus disorder prediction 143 172 - -
Vivi34g00015 491 MobiDBLite consensus disorder prediction 1 29 - -
Vivi34g00015 491 MobiDBLite consensus disorder prediction 112 172 - -
Vivi34g00015 491 CDD bZIP_HBP1b-like 170 222 - -
Vivi34g00015 491 FunFam BZIP family transcription factor 169 218 - -
Vivi34g00015 491 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Vivi34g00015 491 SMART brlzneu 166 229 IPR004827 GO:0003700|GO:0006355
Vivi34g00015 491 MobiDBLite consensus disorder prediction 112 141 - -
Vivi34g00015 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 212 IPR004827 GO:0003700|GO:0006355
Vivi34g00015 491 Pfam Basic region leucine zipper 166 212 IPR004827 GO:0003700|GO:0006355
Vivi34g00015 491 Pfam Seed dormancy control 253 325 IPR025422 GO:0006351|GO:0043565
Vivi34g00015 491 SUPERFAMILY Leucine zipper domain 170 213 IPR046347 GO:0003700|GO:0006355
Vivi34g00015 491 Gene3D - 169 221 - -
Vivi34g00015 491 PANTHER TRANSCRIPTION FACTOR TGA9 127 491 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00015 135 491 bZIP Transcription Factor Family AT3G12250 65.940 1.08e-160 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi34g00015 DOG1 1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00015 K14431 - gmx:778136 711.835