Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00007 ATGTCGAGCGATAAGAAAGAGAACGAGTTTTTTGTGGACGCTAACGAAGAAGAAACCGATATCGAAGCTGTGAATTACGATAGCGAAAGTAGTCATGAAAATGATGGTGGCAGTTACGATGAACTCGATCGCAATGACGGACAGCCTGAGTCTTTCTCTTCTCAACAATGGCCTCAAACTTTCAATGAGGCTATTGATCCTTTGACGATCAATGCTCCGAATCTTGGATCAATTCTGAGAGCTCCGAGTGTGCTATACTCGAGCTTTGTGAGTCGTTCGTCGAGGAGTTATTTAGAGTTACAAGATGGAAAGGCTTCTTTTCTGTCTGGGAGTCAAATTCAGGAAGGGGTTCCTAGACAGTCGACATGGTGGGAAAAAGCTTCAATTCAAATGCACGTTCCTGAGGAATTGCCTCCTGGTTATGGATGTACCTTCACTCAGACTATATTTAATGGGATTAATGTGATGGCTGGAGTTGGGCTCCTATCTACACCTGATACTGTGAAGCAAGCTGGGTGGGCCAGTTTGTTGGTGATGGTTATTTTTGCAGTTGTGTGCTGTTATACTGCAGAACTAATGAAACATTGCTTTCAAAGCAGAGAAGGCATCCTTAGCTACCCAGATATAGGAGAAGCCGCATTTGGAAAATATGGCCGAGTTATTATATCAATCGTTTTGTACACCGAATTATATTCATATTGTGTGGAGTATATCATCATGGAAGGTGATAACCTTACTGGTCTTTTTCCTGGAACATCCTTGCATTGGGGAGGTTTGGATTTGGATGCCAAGCACTTATTTGGAATTTTGACTGCACTTGTTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGAGTAGTTTCCTATCTCTCAGCTGGAGGGGTTATTGGTTCAACTTTGATCGCTATTTGTGTGGTTGTTGTTGGGACAAGAAATGATATTGGATTCCATCAGCCTGCTCCATTAGTGAAGTGGAGTGGCGTTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTGCTGGACATTCAGTTTTTCCCAATATATATCAGTCTATGGCTAACAAAAGAGAATTCACAAAGGCAATAATCATATGTTTTATTTTGCCCATGTTGTTATATGGAGGTGTTGGAATCGCGGGATATCTCATGTTTGGTGAAAAGACATTGTCTCAGATAACATTGAATCTACCACCAAATGCCCTTGCTTCCAAAGTCGCTTTGTGGACTATAGCAGTTATTCCGCTAACTAAATATGCTTTGATGATGAACCCGCTGGCAAGAAGTGTAGAGGAATTGTTGCCTGCTAGCATCTCAAACACCAATTGGTGTTTCCTTCTTCTAAGAACAGCATTGGTTGTATCTACTGTTTGTGCTGCTTTTATCATTCCATTTTTTGGGCTAGTGATGGCTTTAATTGGTTCTCTCCTCAGTGTTCTTGTGGCAGTGATATTGCCAGCTTTATGTTTTCTAAAAATTGTGGGGAAGAAGGCAACAAATACACAGGTTGCTCTCAGTATTATAATTACTGCATGGGGTGTAGTTTGTGCTGCTTTTGGATCATACTCATCTCTATTAAAGATTTTGCAGCAGCGCTGA 1596 0.4129 MSSDKKENEFFVDANEEETDIEAVNYDSESSHENDGGSYDELDRNDGQPESFSSQQWPQTFNEAIDPLTINAPNLGSILRAPSVLYSSFVSRSSRSYLELQDGKASFLSGSQIQEGVPRQSTWWEKASIQMHVPEELPPGYGCTFTQTIFNGINVMAGVGLLSTPDTVKQAGWASLLVMVIFAVVCCYTAELMKHCFQSREGILSYPDIGEAAFGKYGRVIISIVLYTELYSYCVEYIIMEGDNLTGLFPGTSLHWGGLDLDAKHLFGILTALVILPTVWLKDLRVVSYLSAGGVIGSTLIAICVVVVGTRNDIGFHQPAPLVKWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKREFTKAIIICFILPMLLYGGVGIAGYLMFGEKTLSQITLNLPPNALASKVALWTIAVIPLTKYALMMNPLARSVEELLPASISNTNWCFLLLRTALVVSTVCAAFIIPFFGLVMALIGSLLSVLVAVILPALCFLKIVGKKATNTQVALSIIITAWGVVCAAFGSYSSLLKILQQR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00007 531 Gene3D Amino acid/polyamine transporter I 142 528 - -
Vivi34g00007 531 FunFam Amino acid transporter AVT1A 141 530 - -
Vivi34g00007 531 PANTHER OS05G0424000 PROTEIN-RELATED 152 512 - -
Vivi34g00007 531 Pfam Transmembrane amino acid transporter protein 144 523 IPR013057 -
Vivi34g00007 531 MobiDBLite consensus disorder prediction 25 47 - -
Vivi34g00007 531 MobiDBLite consensus disorder prediction 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00007 30 466 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.062 0.0 541