Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi34g00006 ATGTCGAGCGATAAGAAAGAGAACGAGTTTTTTGTGGACGCTAACGAAGAAGAAACCGATATCGAAGCTGTGAATTACGATAGCGAAAGTAGTCATGAAAATGATGGTGGCAGTTACGATGAACTCGATCGCAATGACGGACAGCCTGAGTCTTTCTCTTCTCAACAATGGCCTCAAACTTTCAATGAGGCTATTGATCCTTTGACGATCAATGCTCCGAATCTTGGATCAATTCTGAGAGCTCCGAGTGTGCTATACTCGAGCTTTGTGAGTCGTTCGTCGAGGAGTTATTTAGAGTTACAAGATGGAAAGGCTTCTTTTCTGTCTGGGAGTCAAATTCAGGAAGGGGTTCCTAGACAGTCGACATGGTGGGAAAAAGCTTCAATTCAAATGCACGTTCCTGAGGAATTGCCTCCTGGTTATGGATGTACCTTCACTCAGACTATATTTAATGGGATTAATGTGATGGCTGGAGTTGGGCTCCTATCTACACCTGATACTGTGAAGCAAGCTGGGTGGGCCAGTTTGTTGGTGATGGTTATTTTTGCAGTTGTGTGCTGTTATACTGCAGAACTAATGAAACATTGCTTTCAAAGCAGAGAAGGCATCCTTAGCTACCCAGATATAGGAGAAGCCGCATTTGGAAAATATGGCCGAGTTATTATATCAATCGTTTTGTACACCGAATTATATTCATATTGTGTGGAGTATATCATCATGGAAGGTGATAACCTTACTGGTCTTTTTCCTGGAACATCCTTGCATTGGGGAGGTTTGGATTTGGATGCCAAGCACTTATTTGGAATTTTGACTGCACTTGTTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGAGTAGTTTCCTATCTCTCAGCTGGAGGGGTTATTGGTTCAACTTTGATCGCTATTTGTGTGGTTGTTGTTGGGACAAGAAATGATATTGGATTCCATCAGCCTGCTCCATTAGTGAAGTGGAGTGGCGTTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTGCTGGACATTCAGTTTTTCCCAATATATATCAGTCTATGGCTAACAAAAGAGAATTCACAAAGGCAATAATCATATGTTTTATTTTGCCCATGTTGTTATATGGAGGTGTTGGAATCGCGGGATATCTCATGTTTGGTGAAAAGACATTGTCTCAGATAACATTGAATCTACCACCAAATGCCCTTGCTTCCAAAGTCGCTTTGTGGACTATAGCAGTTATTCCGCTAACTAAATATGCTTTGATGATGAACCCGCTGGCAAGAAGTGTAGAGGAATTGTTGCCTGCTAGCATCTCAAACACCAATTGGTGTTTCCTTCTTCTAAGAACAGCATTGGTTGTATCTACTGTTTGTGCTGCTTTTATCATTCCATTTTTTGGGCTAGTGATGGCTTTAATTGGTTCTCTCCTCAGTGTTCTTGTGGCAGTGATATTGCCAGCTTTATGTTTTCTAAAAATTGTGGGGAAGAAGGCAACAAATACACAGGTTGCTCTCAGTATTATAATTACTGCATGGGGTGTAGTTTGTGCTGCTTTTGGATCATACTCATCTCTATTAAAGATTTTGCAGCAGCGCTGA 1596 0.4129 MSSDKKENEFFVDANEEETDIEAVNYDSESSHENDGGSYDELDRNDGQPESFSSQQWPQTFNEAIDPLTINAPNLGSILRAPSVLYSSFVSRSSRSYLELQDGKASFLSGSQIQEGVPRQSTWWEKASIQMHVPEELPPGYGCTFTQTIFNGINVMAGVGLLSTPDTVKQAGWASLLVMVIFAVVCCYTAELMKHCFQSREGILSYPDIGEAAFGKYGRVIISIVLYTELYSYCVEYIIMEGDNLTGLFPGTSLHWGGLDLDAKHLFGILTALVILPTVWLKDLRVVSYLSAGGVIGSTLIAICVVVVGTRNDIGFHQPAPLVKWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKREFTKAIIICFILPMLLYGGVGIAGYLMFGEKTLSQITLNLPPNALASKVALWTIAVIPLTKYALMMNPLARSVEELLPASISNTNWCFLLLRTALVVSTVCAAFIIPFFGLVMALIGSLLSVLVAVILPALCFLKIVGKKATNTQVALSIIITAWGVVCAAFGSYSSLLKILQQR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi34g00006 531 Gene3D Amino acid/polyamine transporter I 142 528 - -
Vivi34g00006 531 FunFam Amino acid transporter AVT1A 141 530 - -
Vivi34g00006 531 PANTHER OS05G0424000 PROTEIN-RELATED 152 512 - -
Vivi34g00006 531 Pfam Transmembrane amino acid transporter protein 144 523 IPR013057 -
Vivi34g00006 531 MobiDBLite consensus disorder prediction 25 47 - -
Vivi34g00006 531 MobiDBLite consensus disorder prediction 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi34g00006 30 466 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.062 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi34g00006 K15015 - gmx:100790344 699.893