Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi345g00007 ATGGGAGTAAAAGAGATGAAAAGAGGGAACAAGAAAGTAAATAATAAAATGGTCCCGGCGGACACCGACTGCCTCGAACATGCTGCCGCGTCCACTACCGCCGCCGCACATCCGCCGCCACGTCAAAACGTTGTGATTTCTTACAAAGATCACGATTCTCTCTCCAGCGGTGGCGGCATCAGCATTCTATCTGGAAGCCGAAATGGAAAGATCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGAGCTTCAATGGAGGATTTCTTTGAGGCCAAAATATCAGAGGTTGACGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGCCACGGAGGTTCACAGACTGCAGAATATCTGAGAAATAATTTATTCAAAAACCTGAGTAGTCATCCTGACTTTATCAAAGACACTAAGACGGCTATTGTCGAAGCATTTAAACAAACAGACATTGATTACCTCAATGCGGAAAAGGGGCATCAAAGAGATGCTGGATCCACTGCATCAACAGCTGTATTGTTAGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTATTGATCACAAACCTGATAGATCTGATGAGCGACGGAGAATTGAACAAGCTGGGGGATTCGTATTATGGGCAGGAACATGGAGGGTCGGTGGCGTTCTTGCCGTTTCCCGTGCATTTGGAGACAAGTTTCTTAGACCATATGTTGTTGCCGAACCAGAAATTCAGGAGGAAGACATTGAAGGCGTCGATTTTTTAATTGTAGCTAGTGATGGTCTTTGGAATGTTATATCAAACAATGAGGCGGTGTCTTTAGTTCAAAATATCACTGATGCAGAAGCTGCATCTAAAGCACTTATTAAAGAAGCTTATACTCGAGGAAGCTCGGACAACATCACCTGCGTCGTTGTTCGATTTGATCCATCATGA 963 0.4403 MGVKEMKRGNKKVNNKMVPADTDCLEHAAASTTAAAHPPPRQNVVISYKDHDSLSSGGGISILSGSRNGKISYGYSSFKGKRASMEDFFEAKISEVDGQMVAFFGVFDGHGGSQTAEYLRNNLFKNLSSHPDFIKDTKTAIVEAFKQTDIDYLNAEKGHQRDAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSIDHKPDRSDERRRIEQAGGFVLWAGTWRVGGVLAVSRAFGDKFLRPYVVAEPEIQEEDIEGVDFLIVASDGLWNVISNNEAVSLVQNITDAEAASKALIKEAYTRGSSDNITCVVVRFDPS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi345g00007 320 CDD PP2Cc 71 317 IPR001932 -
Vivi345g00007 320 Pfam Protein phosphatase 2C 73 310 IPR001932 -
Vivi345g00007 320 PANTHER PROTEIN PHOSPHATASE 52 317 IPR015655 GO:0004722|GO:0006470
Vivi345g00007 320 SUPERFAMILY PP2C-like 65 318 IPR036457 -
Vivi345g00007 320 ProSitePatterns PPM-type phosphatase domain signature. 103 111 IPR000222 GO:0043169
Vivi345g00007 320 Gene3D - 64 320 IPR036457 -
Vivi345g00007 320 ProSiteProfiles PPM-type phosphatase domain profile. 72 317 IPR001932 -
Vivi345g00007 320 SMART PP2C_4 62 315 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi345g00007 44 320 PP2C-type Phosphatase Gene Family AT1G43900 70.758 9.49e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi345g00007 K17506 - gmx:100776867 490.345