Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi344g00034 ATGTCCGACCCCAAAACCACCGACCAATACGGCGTCCTCCTCTACTACAAATACGTCGATATTCCAAACCTCAACGACCTCCTCACATTCTACCGCTCCAACTGCTCCTCCCTTTCCCTCCTTGGCCGTGTTCGCCTCTCTCCCCATGGCGTCAATGTCACAGTTGGTGGCAATTTATCCTCTTTGGAACAACACATCGAAGCACTCAAAGCCAATAGTACTCTATTTCACGGCACTGATTTCAAGCTTGCAACTTGTCATCAACCATTGAACGACGACGTTGCCAAGGAGTGTGGTTTCACTTCACTCTCGATTCGTATTGTCAAGGAACTGGTTACTCTCAGTTCTCATCCACTGTTAAAGTCACCAGAAATCTCAAATGCTGGAACACATTTATCAGCACTTGAGTTTCATTCTACACTTCACAATGCTAATAAGGAGAGTCCAGAAAACGGCCTTGTTTTACTTGATGCAAGGAATCTTTATGAAACAAGGATTGGGAAATTTCATGCGCCAAATGTTGAAACTTTGGATCCACAGGTTAGGCAATACAGTGATTTCTCCTCGTGGATAGATGATAGAAGCGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAACGTGTTTCAGCTATTTGGTGGTATTCAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGGAAAGAATTTTGTTTTTGATCATCGGATATCAGTTGGAGGTTCAGAGGCTAGTAGTACAATTGGTACCTGTCTTATTTGTCAATGTTCCTTTGACGATTATTCTTCACGTTGTCGATGTGCTTATTGCCGAATGCTTGTCTTGGTTTGTGTGAATTGCCAGAACGAATCTGCACTGTATATTTGTGAGCTATGCCAAAAACAGGGCAAGGCTGTTGGGTCAAAGCAGTTAAATGAAAACGATGATTCAAAAAAATCATTACAAGGTGTCGAGTTCCAAGAATTTTCTTCAGATACTATGCTCTTGCCTCAGGAGCTTAGGGGAGACGGTAAGATGTAA 1092 0.4258 MSDPKTTDQYGVLLYYKYVDIPNLNDLLTFYRSNCSSLSLLGRVRLSPHGVNVTVGGNLSSLEQHIEALKANSTLFHGTDFKLATCHQPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGTHLSALEFHSTLHNANKESPENGLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRSEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRISVGGSEASSTIGTCLICQCSFDDYSSRCRCAYCRMLVLVCVNCQNESALYICELCQKQGKAVGSKQLNENDDSKKSLQGVEFQEFSSDTMLLPQELRGDGKM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi344g00034 363 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 278 - -
Vivi344g00034 363 Gene3D - 121 277 IPR036873 -
Vivi344g00034 363 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Vivi344g00034 363 Pfam Rhodanase C-terminal 251 317 IPR022111 -
Vivi344g00034 363 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Vivi344g00034 363 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 5 332 IPR020936 -
Vivi344g00034 363 SMART rhod_4 139 246 IPR001763 -
Vivi344g00034 363 Gene3D - 2 112 - -
Vivi344g00034 363 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 119 263 IPR036873 -
Vivi344g00034 363 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi344g00034 8 322 Sulfurtransferasese or Rhodanese AT1G09280 71.746 8.69e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi344g00034 - - mtr:25484701 674.47