Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi344g00030 ATGGATTCATTCCAAGAACCACCACACACCTCGCAAGAATCCAATCACAAAAAACGCCGCAAAATCGGTGACACCACCGCCGATCAAAGCTCCCTCACTCTCATGCGGTGGAGATCTGAATCGGACCAGAACAACTACTCCAAAAAACTAATCGAAGCTCTCAGCCGGATCAACTCTCCATCAACCACCAAACCTACACCCGCCGGTCAAGTCCGCGAAACCGCCGATCGCGTCCTCGCCACATCCGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAATGGAAGAAACTCCGCAGACATCACCGTAAAGTCAAGAAAGCCGCAACCGGATTGAACAAAACCGAGAGGATGACGAGACGGTTACCGGCTGTGCAGAAGAAAACGCGCGTGCTCGGCCGGTTGGTTCCCGGTTGCCGGAAAGTACCTTTACCGAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCCTTGGAGATGCAAGTGCGTGCTATGACTGCTCTCGCTGAGCTTCTCGCCGGTCGAACATCGGCGGGACTCGCCGGTCAAGTGCTGAGTTGA 567 0.5344 MDSFQEPPHTSQESNHKKRRKIGDTTADQSSLTLMRWRSESDQNNYSKKLIEALSRINSPSTTKPTPAGQVRETADRVLATSAKGRTRWSRAILGKWKKLRRHHRKVKKAATGLNKTERMTRRLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGRTSAGLAGQVLS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi344g00030 188 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 174 IPR044660 GO:0006355
Vivi344g00030 188 MobiDBLite consensus disorder prediction 11 25 - -
Vivi344g00030 188 MobiDBLite consensus disorder prediction 1 31 - -
Vivi344g00030 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 177 IPR036638 GO:0046983
Vivi344g00030 188 CDD bHLH_AtIBH1_like 118 171 IPR044549 GO:0006355
Vivi344g00030 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 160 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi344g00030 1 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 42.328 3.86e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi344g00030 - - gmx:100807196 207.994