Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi341g00006 ATGGGAGATAGTGACATTGAAGGCGGCGGCGGTGGAGATGACGGTTTTCGTTCGCCGATCGGCCGTAAGTATCGTCCCGTGTTGGCGAACGATCGTGCTGTACTTGAGATGTCTTCCATAGATCCAGGATCTTCTTCTTCCTCAGCGTTTCCAGATCAACCTCATAATCTCAGAAAAATAAATGTAAGTTCAGATGGTAAAGATGGGAACTCTCCTCGGCAAGCTCAACCTAATGGACCTCAGCAGGAATCTAAACTGGAACTGTTCGGATTTGATTCTCTTGTCAATATTCTTGGTCTCAAAAGCATGACTGGTGAGCAACCTGCACCGCCGTCTAGTCCTAGAGATGGTGAGGATATTACAGTTCCTGCTGGGCTGCCAAAGCCTGAAGCTCTCAAACTAGGGACACTGATGGGTGTATTCATTCCTTGTGTTCAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGGTTCTTGTTGCTTTGTGTGGCACTTGTACGTTCCTTACTTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGTATTGGTTTATGCTTTTTCCTTGGTAATGCAGTTGCTGGAGCTCTGTATGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAATTCCTGCTGCTGGAATTTTTAGAGCGTCTATGACACCAGTTAATGGTACCACAACTGCGATACAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATTGTTGTGACTATTATGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTTATACCTGTTCTATTCTCACTCGTCTGCATATATTTGGGAATTCTGTTGGCAAAGGAGGATCATCCCACAGAGGGAATTACTGGGTTGAGTTTGAAGAGTATTAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAATGATGCTGGAATTCCAGATCCCGATGGTTCTGTAACCTGGAATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTGACAGGAATAATGGCAGGTTCTAACCGATCATCTTCTCTGAGAGATACTCAACGATCTATTCCTGTTGGAACTTTATCTGCAACTCTTGTAACTTCTCTTATGTATCTTATTTCTGTGATAATGTTTGGCGCCATTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTTCAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACCGGCGCCCCGCGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTCTAAACTACTTTAAAGTTGCAGATGGTAGCGAGCCACATGTTGCTACTCTTTTTACTGCTTTCCTATGTATTGGGTGTGTCATCATCGGAAATCTGGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTGTCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCACTTCTAGGAGCATTACTTTGTGTAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTTTCTTTGGCCCTTGCAAGTCTTATATATAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGACGGTTTCAAAAGCGCTTATTTCCAACTTGCACTTCGTAGCCTTCGGTCGCTAGGAGCAAATCAAGTGCACCCAAAGAATTGGTATCCGATTCCGCTAGTGTTTTGTCGGCCCTGGGGAAAACTGCCAGAAAATGTTCCCTGTCATCCCAAACTTGCAGACTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGACTATATTTGTCTCCATACTAGACGGGGATTACCATGAATGTGCTGAAGATGCCAAGACTGCTTGTAAACAACTTAGCACCTACATTGAGTACAAGAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGTAGGTTTTCGCGGCATCGTTCAGACAATGGGCCTTGGCAACCTCAAGCCAAACATCGTGGTGATGCGTTATCCAGAAATATGGCGCCGGGAGAACTTAACGGATATCCCCGCTACCTTTGTTGGTATAATTAATGACTGCATTGTTGCAAACAAAGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCAAATGTATACCAGAAGCAGTACGGTACAATTGACTTGTATTGGATTGTAAGAGATGGTGGTCTCATGCTACTTCTCTCTCAATTGCTTCTTACCAAGGAGAGTTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGAGGATGCGGATGCCGAGGGGCTGAAAGCTGATGTTAAAAAATTCCTTTATGATCTTCGGATGCACGCAGAAGTCTTTGTCATAACAATGAAATGGGATGTACAGGTGGATAGTGCGTCTCCACAAGATGAATCATTAGACGCATTTACCAGTGCTAATCAAAGAATTGTTGATTATTTAACCGAAATGAAGGCAAGAGCAGAGAGAGAAGGTACCTCACTAATGGCAGATGGCAAGCCCGTGGTTGTGAACGAGAAGCAAGTCGAGAAGTTTTTATACACAACACTTAAGCTCAATTCCATAATTTTGAGATACTCAAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCACCATTGAGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGATTGTGAGAGGATATCGTAGAGATGTTGTAACTCTATTTACATAA 2937 0.4317 MGDSDIEGGGGGDDGFRSPIGRKYRPVLANDRAVLEMSSIDPGSSSSSAFPDQPHNLRKINVSSDGKDGNSPRQAQPNGPQQESKLELFGFDSLVNILGLKSMTGEQPAPPSSPRDGEDITVPAGLPKPEALKLGTLMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLVLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAIPAAGIFRASMTPVNGTTTAIQSPSSHDLQIYGIVVTIMLCFIVFGGVKMINRVAPAFLIPVLFSLVCIYLGILLAKEDHPTEGITGLSLKSIKENWSSDYQKTNDAGIPDPDGSVTWNFNSLVGLFFPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLVTSLMYLISVIMFGAIATREKLLTDRLLSATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEDAKTACKQLSTYIEYKNCEGVAEIVVAPNMSVGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDADAEGLKADVKKFLYDLRMHAEVFVITMKWDVQVDSASPQDESLDAFTSANQRIVDYLTEMKARAEREGTSLMADGKPVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi341g00006 978 FunFam Cation-chloride cotransporter 1 133 595 - -
Vivi341g00006 978 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 111 975 IPR004842 GO:0006811|GO:0015377|GO:0016020
Vivi341g00006 978 NCBIfam K-Cl cotransporter 72 978 IPR004842 GO:0006811|GO:0015377|GO:0016020
Vivi341g00006 978 Gene3D Amino acid/polyamine transporter I 132 595 - -
Vivi341g00006 978 MobiDBLite consensus disorder prediction 38 82 - -
Vivi341g00006 978 MobiDBLite consensus disorder prediction 103 122 - -
Vivi341g00006 978 Pfam Solute carrier family 12 647 768 IPR018491 GO:0006811|GO:0016020|GO:0022857
Vivi341g00006 978 Pfam Solute carrier family 12 779 977 IPR018491 GO:0006811|GO:0016020|GO:0022857
Vivi341g00006 978 Pfam Amino acid permease 139 613 IPR004841 GO:0016020|GO:0055085
Vivi341g00006 978 MobiDBLite consensus disorder prediction 1 25 - -
Vivi341g00006 978 MobiDBLite consensus disorder prediction 39 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi341g00006 134 978 Inorganic Solute Cotransporters AT1G30450 83.510 0.0 1452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi341g00006 K14427 - gmx:100795205 1698.33