Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi340g00015 ATGGCATCATCATCTTCAAGCTTGTACTCAAATTCACCATGTGCTGCATGCAAGTTTTTGAGAAGGAAGTGCATGCCAGATTGCATATTTGCACCATACTTCCCACCAGAAGAACCACAGAAATTTGCAAATGTTCACAAAATATTTGGTGCAAGCAATGTGAGTAAACTTCTGAATGAAGTTCAACCTCATCAAAGAGAAGATACTGTCAACTCTCTTGCCTATGAAGCTGAGGCAAGGATTAAAGATCCTGTTTATGGTTGTGTTGGTGCTATTTCAGTCCTCCAAAGACAAGTTATTAGTCTCCAAAAGGAACTTGATTCTACTAATGCTGATTTGGTTCGTTATAATGAAATATTGCCCAATCATGCAGGACCTTCACCACCTCCTCCTCCAACTTTTTACTATCCTTCACCTTGGAACAATAATGATCCTCATGGGAATGCTTATCACACAGGTGGAGGTGACAATATATAA 477 0.3941 MASSSSSLYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDTVNSLAYEAEARIKDPVYGCVGAISVLQRQVISLQKELDSTNADLVRYNEILPNHAGPSPPPPPTFYYPSPWNNNDPHGNAYHTGGGDNI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi340g00015 158 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Vivi340g00015 158 Coils Coil 92 112 - -
Vivi340g00015 158 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 126 - -
Vivi340g00015 158 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi340g00015 9 120 AS2 family AT3G27650 82.143 5.66e-68 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi340g00015 LOB 1.8e-42 No_clan