Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi340g00011 ATGGAAAAACAGCATCCCATGAGCCACGAGAAAGCAACCGAGTTTCGACCATTCTCATCCGCGGTAACACCTCATATGCGTACATTTCACCTATCATGGTTCAACCTCTTCTCCTGTTTCTTCACCACCTTCTCCATCCCTCCTCTCCTCCCAATCATCCGCCACGACCTCAACCTCACAGCCGGCGACATAGGCAGAGCAGGTTCCGCTTCTTTCGCGGGCTCCATCCTCTCCCGCCTACTCATGGGCCCAATCTGCGACCTCGTGGGTCCCCGTAGAGCCTCGGGTATTCTTTCTCTCATAACCGCTCCCATCATCCTCCTCACCTCCATTGCCTCTACTCCCGGCGAATTCATCGCCGTTCGTTTCCTCGTGGGCTTCTCTCTCGCCAATTTCGTCGCAAATCAGTTCTGGATGAGCTCTATGTTTGACGAATCAGTTGTTGGGTCAGCCAACGCTTTCTCTGCTGGCTGGGCAAACACCGGTTCCGGCGTCACTCAACTTGTGATGCCTTTAATTTACTCCTCTCTCGTCACGTTTCTCCCATCCTCCACCGCTTGGCGGGTATCATTTATAGTTCCAGCTGTTTTCCAAACAGTTACAGGTGTGTTAGTTTTAGCATTCGGCCATGAGACAAACAAAATTCCATCAGAATCAAAGGAGAATACATTGAAAGTGATATTTGGTGGGTTAAGGGATTACAGAGGATGGATACTGGGGTTACTATATGGATTCTCGTTTGGGGTTGAAATGACAACAGATAACATAATAGCGCAATATTTTTATGACAGCTTTGGGGTGAACCTAGAAACAGCAGGAATGATTGCAGCATGTTTTGGGATAACGAATTTGTTTTCAAGACCAATGGGAGGGTTGGTTTCAGACAAAATGGGGAAGAGGTTTGGTATGAGAGGGAGATTGTGGGGTTTGTGGATTGTTCAAACGGTGGCGGGTTTGCTTTGTGTGATGCTTGGACGACTTGACTCCTTGTGGAGTTCTATTGTTATCATGTGTTGTTTCTCTGTTTTTGTTCAAGCTGCTTCTGGCCTCACGTTTGGTGTGGTTCCCTTTGTTTCTAAAAGTTCACTAGGGGTAATATCGGGAATGACAGGGAGTGGTGGAACAATAGGAGCTGTTGTAACTCAAATGCTGCTATTCTCAGGCGACAACTTATCAAAGCAGACGAGCATATCACTAATGGGCTTAATGATGATACTATGTACTCTTCCTGTTACCTTAATCTACTTCCCTCAATGGGGTGGCATCTTTTATGCTCCTTCTCCACATTATGATTATGGTTATGATCAAGAAAACTATACCTTGTTGGAGTAA 1332 0.4647 MEKQHPMSHEKATEFRPFSSAVTPHMRTFHLSWFNLFSCFFTTFSIPPLLPIIRHDLNLTAGDIGRAGSASFAGSILSRLLMGPICDLVGPRRASGILSLITAPIILLTSIASTPGEFIAVRFLVGFSLANFVANQFWMSSMFDESVVGSANAFSAGWANTGSGVTQLVMPLIYSSLVTFLPSSTAWRVSFIVPAVFQTVTGVLVLAFGHETNKIPSESKENTLKVIFGGLRDYRGWILGLLYGFSFGVEMTTDNIIAQYFYDSFGVNLETAGMIAACFGITNLFSRPMGGLVSDKMGKRFGMRGRLWGLWIVQTVAGLLCVMLGRLDSLWSSIVIMCCFSVFVQAASGLTFGVVPFVSKSSLGVISGMTGSGGTIGAVVTQMLLFSGDNLSKQTSISLMGLMMILCTLPVTLIYFPQWGGIFYAPSPHYDYGYDQENYTLLE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi340g00011 443 CDD MFS_NRT2_like 29 413 IPR044772 GO:0015112
Vivi340g00011 443 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 439 IPR044772 GO:0015112
Vivi340g00011 443 SUPERFAMILY MFS general substrate transporter 14 415 IPR036259 -
Vivi340g00011 443 Gene3D MFS general substrate transporter like domains 24 218 IPR036259 -
Vivi340g00011 443 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 413 IPR020846 GO:0022857
Vivi340g00011 443 FunFam Nitrate transporter 2.1 220 421 - -
Vivi340g00011 443 Gene3D MFS general substrate transporter like domains 219 420 IPR036259 -
Vivi340g00011 443 Pfam Major Facilitator Superfamily 33 379 IPR011701 GO:0022857|GO:0055085
Vivi340g00011 443 FunFam Probable high-affinity nitrate transporter 2.4 21 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi340g00011 8 426 Inorganic Solute Cotransporters AT5G14570 63.182 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi340g00011 K02575 - qsa:O6P43_008930 644.425