Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00065 ATGCGACCACAACACAACCTCCTACTTACCTTAATAACCCTGTTACATTCATGGAACTACTTCCATCTCACACAAGCTGACCCTCAAACACGTTTAATCAACAAAGGTTGTAGCCAATACAACGCAACAAACTTGTCCAATTTCTACCAAAATCTAAACGCAACTCTCTCAGACTTGAAATCACAGGTCGCAAATGAAAGCAAGCATTTTGCAACGGCACAATCCGCCAAAGGAGCAAACCCTGTTTATGCTTTGTTTCAGTGTAGGAATTACCTCTCTAATTCTGATTGCGCCGCTTGCTTCACCGTCGCCGCCGCACAAATACGTAACTGCTCCGCTGGTTCCAACGGTGCTCGTGTTATTTACGATGGTTGCTTTCTTAGGTACGAGAGCAATGGATTCTTCGACCAAACAACTCTACCTGGAAACAGTATGATTTGTGGAACTGAAACAGCAAATGGAGCAGCTGCTTTTACTGCAGCCGCACAACAACTTTTACTGGATCTACAAACAGCTACACCCAAAATTCCTGGTTTCTTTGCAGCTACAAAGACGCCAGTTTCTGGAACTGGAAATGCAATATATGCCATGGCACAATGTGCTGAATCAGTCACTCAAAGTGGTTGTTCAGATTGCTTAACAGTTGGATTCAACAACATACAGAGCTGTTTTCCTAATGCAGATGGTAGAGCATTTGATGCTGGTTGTTTTATGAGATACTCAGAAACATCTTTCTTTGCTGATAACCAGACCATTGATATTACACCTTACCTAAAACAAGGTTCAAGTAAGAAGGGAGCCATTATTGGAGGTGTTGTTGGAGGTGTGGTAGCCCTTATTGTGATCACCCTTATTGCACTATTTGTTTGGCTTAGGCTCTACAACAAGAAACCCAAGAGACATCATAGAGGTGACATATTAGGAGCAACTGAGTTGAAAGGTCCACTTACTTACCGATATAACGATTTGAAGTCTGCAACGAAAAATTTTAACGAGGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATACAAGGGAACTCTGAAAAATGGTAAAGTAGTTGCTGTCAAGAAATTGATTTTAGGCCATTCCGGGAAGATGGATGAACAATTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATAGGAATTTAGTTCGACTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAACAGCCTTGACAGATTCTTATTCGGTGAAAAGAAAGGTTCCCTTAATTGGATTCAAAGATATGATATAATTTTAGGCACAGCAAGAGGTTTGGCCTATCTGCATGAAGATTTCCATGTTTGCATCATACATAGAGATATAAAGACTAACAACATCCTCTTGGATGATGATCTTCAACCTAAAATTGCTGATTTCGGATTGGCAAGGCTTTTACCGGAAGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATACACTGCACCAGAATACGCCATCCACGGTCAGTTATCAGTGAAGGCTGATACCTACAGTTTTGGCGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGTAGTGAGTTAAGGGATGATGCTGATGGTGAATTCCTTCTTCAAAAGGCTTGGAAACTATATGAGGAAGAAAGACACTTGGAGTTAGTTGACAAGACACTGAACCCTAGTGACTATGATGCACAAGAGGTGAAGAAAGTTATAGAGATTGCATTACTTTGCACTCAAGCAACAGCCGCTACAAGACCAACTATGTCTGAAGTACTAGTTCTACTCAAAAGCAAGAACTTTGTGGAGCATATGAAACCAACCATGCCTGTCTTTGTTAACACTAACTTAAGACCTCGGACAGATACCTCTACCTCAACTGCTTCTTCAAAATCTAATGCAACTGTTTCCACATCTATATTATCAGCTAGATGA 1950 0.4051 MRPQHNLLLTLITLLHSWNYFHLTQADPQTRLINKGCSQYNATNLSNFYQNLNATLSDLKSQVANESKHFATAQSAKGANPVYALFQCRNYLSNSDCAACFTVAAAQIRNCSAGSNGARVIYDGCFLRYESNGFFDQTTLPGNSMICGTETANGAAAFTAAAQQLLLDLQTATPKIPGFFAATKTPVSGTGNAIYAMAQCAESVTQSGCSDCLTVGFNNIQSCFPNADGRAFDAGCFMRYSETSFFADNQTIDITPYLKQGSSKKGAIIGGVVGGVVALIVITLIALFVWLRLYNKKPKRHHRGDILGATELKGPLTYRYNDLKSATKNFNEENKLGEGGFGDVYKGTLKNGKVVAVKKLILGHSGKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANNSLDRFLFGEKKGSLNWIQRYDIILGTARGLAYLHEDFHVCIIHRDIKTNNILLDDDLQPKIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGQLSVKADTYSFGVVVLEIISGQKSSELRDDADGEFLLQKAWKLYEEERHLELVDKTLNPSDYDAQEVKKVIEIALLCTQATAATRPTMSEVLVLLKSKNFVEHMKPTMPVFVNTNLRPRTDTSTSTASSKSNATVSTSILSAR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00065 649 FunFam Cysteine-rich receptor-like protein kinase 2 296 406 - -
Vivi33g00065 649 Gene3D Transferase(Phosphotransferase) domain 1 407 614 - -
Vivi33g00065 649 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Vivi33g00065 649 FunFam Cysteine-rich receptor-like protein kinase 2 407 609 - -
Vivi33g00065 649 Gene3D - 143 245 IPR038408 -
Vivi33g00065 649 Gene3D - 29 134 IPR038408 -
Vivi33g00065 649 ProSiteProfiles Protein kinase domain profile. 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00065 649 Gene3D Phosphorylase Kinase; domain 1 295 406 - -
Vivi33g00065 649 Gene3D Single helix bin 257 293 - -
Vivi33g00065 649 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Vivi33g00065 649 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Vivi33g00065 649 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Vivi33g00065 649 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Vivi33g00065 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Vivi33g00065 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 636 - -
Vivi33g00065 649 FunFam Cysteine-rich receptor-like protein kinase 2 142 245 - -
Vivi33g00065 649 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Vivi33g00065 649 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Vivi33g00065 649 MobiDBLite consensus disorder prediction 619 649 - -
Vivi33g00065 649 SUPERFAMILY Protein kinase-like (PK-like) 314 622 IPR011009 -
Vivi33g00065 649 Coils Coil 49 69 - -
Vivi33g00065 649 SMART serkin_6 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00065 649 CDD STKc_IRAK 336 602 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00065 3 649 Receptor kinase-like Gene Family AT1G70520 36.722 8.00e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi33g00065 PK_Tyr_Ser-Thr 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00065 - - gmx:100813585 978.008