Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00064 ATGATGCTGCAACTTAAGCTAGTGTTCACAACGTTGGTGTGTTGGAACATAATAATTAGCTATAACTGTGTAGTTGGAGATTCACAAACAAGTATAGTACTGAGCAGTGGTTGCAGCACATACAACACATCAAATTTGCGTAGCTTCTATGCAAACATTAATGGAACATTTTCAGATTTGGGAAATCAAATTAGCAATGGAAGCAAACACTTTGCAACGGCAAAAGAAGCAAGAGGAAATGTGATAGTATATTCTCTATTTCAATGCAGAAATTACCTCTCCAAAAAGGATTGCGTTGCTTGCTTCAACACAGCTTCTACTAAAATTCGTAACTGCTCAGCTTCCAATGGTGCTAGACTCGTCTACGATGGCTGTTTCTTAAGGTACGAGAGTGAAAGATTCTACGATCAAACAAATCAACCAGGGGGTGGTATATTATGTGGGAACAAGGCTGCAAAGGAAGGTGCTTCTTTTGGAACAATTGGACTAAAAGTGCTTATGGATCTCCAATTAGCAACACCAAAAATTAAAGGCTTTTTTGCAGCTACTAAGACAGTGGTGAGTCCTGGTAGCAATAGTTCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACAGAAAGTGCTTGTCTTGATTGCATGACAGTTGGATACAACAGCTTGCAAACTTGTCTTCCTAATACAGATGGTAGAGCATATGAAGCAGGGTGTTTTATGAGATACTCAGAGACACCCTTTTTTGCTGATAAAAAGGCTATTGATATCACAACCTATTTAAATCAAGGAGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGTTGTCGGAGGTGTAGGTCTTGTTGCGATCATTCTTGCAATATTAGCTTGGCGACAATACAAAAAACCCAAGAGAGCTCCTAGAGGCAATATATTGGGAGCAACTGAGCTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTGAAAGCTGCAACAAAAAACTTCAGTGAAGAAAATAAACTGGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACTTTGAAAAATGGAAATGTTGTAGCAGTCAAGAAACTGGCTTTGGGAAAATCCAGCAAGATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAAACAAGAGAGAATCCTTGTTTATGAATACATGGCCAACAGCAGCCTAGACAAATTCTTATTTGGTGAAAAACTAGGCTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTAGGCACGGCAAGGGGACTGGCCTACCTACATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATACTCCTTGATGATAATCTTCACCCCAAAATTGCTGATTTTGGATTGGTGCGGCTTTTACCCGGGGATCAATCTCATCTAAGCACAGGAGTTGCAGGAACATTGGGATACACGGCACCTGAGTATGCAATTCATGGTCAATTATCAGAAAAGGCTGATACCTACAGTTATGGTATTGTAGTCCTAGAAATCATAAGCGGTCAAAAGAGTACAGAAGTAAAGGAAGATGATGATGGTGATTACCTTCTTCAAAAGTCATGGAAACTGCATGAGAGAGGCAGGCACTTGGAGCTCGTGGACAAGACCTTAGACCCTAATGATTATGATGGAGAAGAAGTGAAGAAAATGATAGAGATTGCTTTACTATGCACTCAAGCATCAGCAGGAATGAGACCAACAATGTCTGAAGTAGTAGTCCTCATCCAAACCAAGAGTTTAGTGGAGCACCTACAACCAACTATGCCTGTGTTTGTAGATACGAATCTTAGGTCTCGTGAAGGACACTCTACCTCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCTTTTCTATTTTATCAGCTCGGTGA 1944 0.3976 MMLQLKLVFTTLVCWNIIISYNCVVGDSQTSIVLSSGCSTYNTSNLRSFYANINGTFSDLGNQISNGSKHFATAKEARGNVIVYSLFQCRNYLSKKDCVACFNTASTKIRNCSASNGARLVYDGCFLRYESERFYDQTNQPGGGILCGNKAAKEGASFGTIGLKVLMDLQLATPKIKGFFAATKTVVSPGSNSSIYAIAQCVETATESACLDCMTVGYNSLQTCLPNTDGRAYEAGCFMRYSETPFFADKKAIDITTYLNQGGSSNKWAIIGGVVGGVGLVAIILAILAWRQYKKPKRAPRGNILGATELKGPVNYKYSDLKAATKNFSEENKLGEGGFGDVYKGTLKNGNVVAVKKLALGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKKQERILVYEYMANSSLDKFLFGEKLGSLNWKQRCDIILGTARGLAYLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLVRLLPGDQSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKEDDDGDYLLQKSWKLHERGRHLELVDKTLDPNDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLIQTKSLVEHLQPTMPVFVDTNLRSREGHSTSTGSSTSNATASFSILSAR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00064 647 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Vivi33g00064 647 Pfam Salt stress response/antifungal 153 243 IPR002902 -
Vivi33g00064 647 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Vivi33g00064 647 FunFam Cysteine-rich receptor-like protein kinase 2 293 404 - -
Vivi33g00064 647 MobiDBLite consensus disorder prediction 622 647 - -
Vivi33g00064 647 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Vivi33g00064 647 Gene3D - 30 134 IPR038408 -
Vivi33g00064 647 Gene3D - 145 246 IPR038408 -
Vivi33g00064 647 FunFam Cysteine-rich receptor-like protein kinase 2 405 607 - -
Vivi33g00064 647 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00064 647 SUPERFAMILY Protein kinase-like (PK-like) 311 597 IPR011009 -
Vivi33g00064 647 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Vivi33g00064 647 FunFam Cysteine-rich receptor-like protein kinase 2 142 246 - -
Vivi33g00064 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 634 - -
Vivi33g00064 647 Pfam Protein tyrosine and serine/threonine kinase 331 596 IPR001245 GO:0004672|GO:0006468
Vivi33g00064 647 FunFam Cysteine-rich receptor-like protein kinase 2 30 134 - -
Vivi33g00064 647 Gene3D Phosphorylase Kinase; domain 1 295 404 - -
Vivi33g00064 647 Gene3D Transferase(Phosphotransferase) domain 1 405 610 - -
Vivi33g00064 647 SMART serkin_6 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00064 647 CDD STKc_IRAK 334 596 - -
Vivi33g00064 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00064 17 647 Receptor kinase-like Gene Family AT1G70520 36.434 1.91e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi33g00064 PK_Tyr_Ser-Thr 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00064 - - gmx:100305452 882.478