Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00062 ATGATGCTGCAAGTTAAGCTAGTCTTCACAACGTTGGTGTGTTGGAACATAATAACTAGTTATAACTGTGTAGTTGGAGATTCACAAACAAGTATAGTACTAAACAGTGGTTGCAGCACATATAACGCATCAAATTTACATAGCTTCTACGCGAACATTAATGGAACATTTTCAGATTTGAGAAATGAAATTAGCAATGGCAGCAAACACTTTGCAACAGCACAAGAAGCAAGAGGAGATGTGATGACATATTCTCTCTTTCAATGCAGAAATTACCTCTCCAAAAAGGATTGTGTTGCTTGCTTCAATACTTCTTCTACTAAAATTCGTGACTGCTCAGCTTCCAATGGTGCAAAACTCATCTATGATGGGTGTTTCCTAAGGTACGACAGTGAAAGGTTCTACGATCAAACAAATCAACCTGGAGGTGGTATATTATGTGGGAACAAGACTGCAAAGGAAGGTGCTTCTTTTGGAACAATTGGACTAAAAGTGCTAATGGATCTCCAATTAGCAACACCAAAAATTAAAGGCTTTTTTGCAGCTACTAAGACAGTAGTGAATCCTGGCAGTGGTAGCAATAGTTCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACAGAAAGTTCGTGTCTTGATTGCATGACCGTTGGATACAACAGCTTGCAAACTTGTCTTCCTAATACAGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATACTCAGATACACCCTTTTTTGCTGATAATCAAGCTATTGATATCACAACCTATTTAAATCAAGGTGGTTCAAGCAACAAATGGGCCATTATAGGTGGCGTTGTTGGCGGTGTAGGTCTTGTTGCGATCATTCTTGCAATTTTAGCTTGGCAACGATACAGAAAACCTAAGAGAGCTCCTAGAGGCAACATATTGGGAACAACCAAGTTGAAAGGTCCAATTAAATACAAGTATAATGATTTGAAAGCTGCAACAAAAAACTTCAGCGAAGAAAATAAACTGGGAGAAGGAGGGTTTAGTAAAGTATACAAGGGTACTCTAAAAAATGGAAATGTTGTGGCAGTCAAGAAACTGGTTTTGGGAAAATCCAGCAAGATAGACAATGATTTTGGAAGTGAAGTAAGGCTTATAATAAGCAATGTTGATCATAGGAATCTTGTTGGACTTCTTGGTTGTTGCAGTAAAAAACAAGAGAAAATCCTTGTTTATGAATACATGGCAAACAGTAGCCTGGACAAATTCTTATTTGGTGAAAAACAAGGCTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTAGGCACAGCAAGAGGACTGGCCTACCTACATGAGGAATTCCACATTCCCATTATACATAGAGATATAAAGAGTAGCAACATCCTCCTTGATGATAATCTTCACCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTCTGTCGGGGAATCGATCTCTAAGAACAGGAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATTCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGCGGTCAAAAGAGTACAAAAGTAAAGGAAGATGATGATGGTGATTACCTTCTTCAAAAGTCATGGAAACTGTATGAGAGAGGCAGGCAATTGGAGCTCGTGGACAAGACCTTAGACCCTAGTGACTATGATGGAGAAGAAGTGAAGAAAACGATAGAGATTGCTTTACTATGCACTCAAACATCAGCAGGAATGAGACCAACAATGTCTGAAGTAGTAGTCCTCCTCCAAACCAAGAGTTTAGTGGAGCACCTACAACCAACTATGCCTATGTTTATAGATACGAATCTTAAGTATAGTGAAGGATACTCAACCTCAACTGGTTCTTCTACATCTAATGCTACCGCTTCCTTTTCAATTTTATCAGCTCGATGA 1950 0.3908 MMLQVKLVFTTLVCWNIITSYNCVVGDSQTSIVLNSGCSTYNASNLHSFYANINGTFSDLRNEISNGSKHFATAQEARGDVMTYSLFQCRNYLSKKDCVACFNTSSTKIRDCSASNGAKLIYDGCFLRYDSERFYDQTNQPGGGILCGNKTAKEGASFGTIGLKVLMDLQLATPKIKGFFAATKTVVNPGSGSNSSIYAIAQCVETATESSCLDCMTVGYNSLQTCLPNTDGRAYDAGCFMRYSDTPFFADNQAIDITTYLNQGGSSNKWAIIGGVVGGVGLVAIILAILAWQRYRKPKRAPRGNILGTTKLKGPIKYKYNDLKAATKNFSEENKLGEGGFSKVYKGTLKNGNVVAVKKLVLGKSSKIDNDFGSEVRLIISNVDHRNLVGLLGCCSKKQEKILVYEYMANSSLDKFLFGEKQGSLNWKQRCDIILGTARGLAYLHEEFHIPIIHRDIKSSNILLDDNLHPKIADFGLARLLSGNRSLRTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTKVKEDDDGDYLLQKSWKLYERGRQLELVDKTLDPSDYDGEEVKKTIEIALLCTQTSAGMRPTMSEVVVLLQTKSLVEHLQPTMPMFIDTNLKYSEGYSTSTGSSTSNATASFSILSAR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00062 649 FunFam Cysteine-rich receptor-like protein kinase 2 408 609 - -
Vivi33g00062 649 ProSiteProfiles Protein kinase domain profile. 330 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00062 649 SUPERFAMILY Protein kinase-like (PK-like) 311 601 IPR011009 -
Vivi33g00062 649 FunFam Cysteine-rich receptor-like protein kinase 2 142 248 - -
Vivi33g00062 649 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Vivi33g00062 649 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Vivi33g00062 649 Pfam Protein kinase domain 331 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00062 649 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Vivi33g00062 649 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Vivi33g00062 649 FunFam Cysteine-rich receptor-like protein kinase 2 296 407 - -
Vivi33g00062 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 632 - -
Vivi33g00062 649 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Vivi33g00062 649 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Vivi33g00062 649 SMART serkin_6 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi33g00062 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Vivi33g00062 649 Gene3D - 144 248 IPR038408 -
Vivi33g00062 649 Gene3D - 30 134 IPR038408 -
Vivi33g00062 649 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Vivi33g00062 649 CDD STKc_IRAK 336 602 - -
Vivi33g00062 649 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00062 17 649 Receptor kinase-like Gene Family AT1G70520 35.294 2.06e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi33g00062 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00062 - - gmx:100305452 860.522