Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00038 ATGCATGAGTCTTCAACCAAAAATAGAATATCTGCTGTTTCACCACTCAATGAAGATTCCACAGATACTACAAAGTCTGATAACTCACTCATAGAAGAAGTTCAGAGACTGAAAGCCGAGGCTAGGAGACTTGAAATGCAATGTGAACTCCAAAACCATGAAACACAAGAGATTCAAAATAAAATCGAGGAGAGTTGGTCCGTGGCGAAAGAGGAAGCGGCTAAATGCAAAGCAGCAAAAGAGGTCATACAAGCTTTGACACAAAGGGTAAGTATGCTCCTCAAAAATGACAAATTGATGGACAACAACACTAACCTCACTATGCCAGAATCTCAACAAGACACTGTAGATATCTTGAAAGCTGAATGGGTAGAGCGGTATGAGGACGGTGTTTACATCACATTGACAACCTCGCCGAGTGGAGAAAAAGAACTTAAGCGCATGAGATTCAGCCGGGAGCTATTTGCGAAGAAGGACGCTGAGAGATGGTGGGATGAGAATTATGCAAAAGTGATTCATAAGTATGGAATTGAAGGATATAAAAAGTAA 549 0.4098 MHESSTKNRISAVSPLNEDSTDTTKSDNSLIEEVQRLKAEARRLEMQCELQNHETQEIQNKIEESWSVAKEEAAKCKAAKEVIQALTQRVSMLLKNDKLMDNNTNLTMPESQQDTVDILKAEWVERYEDGVYITLTTSPSGEKELKRMRFSRELFAKKDAERWWDENYAKVIHKYGIEGYKK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00038 182 Pfam Transcription factor regulating root and shoot growth via Pin3 120 175 IPR013591 -
Vivi33g00038 182 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
Vivi33g00038 182 MobiDBLite consensus disorder prediction 7 24 - -
Vivi33g00038 182 MobiDBLite consensus disorder prediction 1 28 - -
Vivi33g00038 182 Coils Coil 27 61 - -
Vivi33g00038 182 Coils Coil 69 96 - -
Vivi33g00038 182 PANTHER PROTEIN BREVIS RADIX-LIKE 1 19 178 IPR044532 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00038 122 182 Major Intrinsic Protein MIP AT1G31880 45.902 2.34e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00038 - - vvo:131622113 359.762