Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00037 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTCGAATCGAATTGGAAATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCAGGAAAAGATTTGGAATGGTATTTTTTCAGTCCACGAGACAGGAAGTATCCGAATGGATCAAGAACAAATAGAGCTACGAAATCTGGATATTGGAAAGCAACCGGGAAAGATCGGAAGGTGAATTCACAGACTCGCGCTGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCTCCTCATGGATCTCGTACCGGTTGGGTTATGCATGAGTATCGTCTTGATGAAAGAGAATGCGACAATCCTTCTTCAGGATTGCAGGATGCATATGCGCTATGCCGAATATTCAAGAAGAGTACAGTGATTGTTCCAAAAGTTGGGGAGCAGTATGTTAATAATGTGACCATGCATGCAAATCATATGACAAGTGATCAATCATCAAGCATTGAGTTATATTCTGAAGGGAGAGATGAAGTTTTAGAGAGCTCAAATTATTTGATGCCATGGGATACCAACTCAACCCAAACCCTAAATGGGGCTAATACTTTTAGCAACAATGGTGGAGATATCACAAGGGACAATAATGGGATTTGGACACAGTTTGTATCAGAAGATTTACTCAATCTTCCAACATCTTCTTCATCGGTTCCCAATTATGGATCCACTCCGAATTACCCTCCATCAAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACCATGCCACCCTTGGAGGTGCAAGACTTCCCTCAAGTTGGTATTTCTGATCACAAAACGACACACTTTGCCTCCGGTTCCATGTGTGGAACCAGAAATGACACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAGGAATTGATTAACCAATCAAACTACTCACATACATTTGGTGGCAATGAAAACTATGGTACTCATCATGAACATGATAATGATTTTACTTTTATGGTTGGCAATAATAATAACTACAATCATATGAGTGATAATATGATGAACTCCATGAGATTTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATAGAGATTGGGAGTCTTGATGATGAATTCAAGACAGAAAGGATGGTTGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAAAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAAGATATTTCAAGCTTCCACACAAATAGGAAAGAGAATGAGGTGCAAGTGGAATCTGAGCAACAAAACATGAACAAAGAAATCAATGACACTGACATTGATAATTTCTCAATGGAGTTTATCAATGATAATGATAACCCTAATGAGAATTTCATAGATGATGGTACCATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGTCAAGTAGCAGACACATTCTTTCACAAGCTAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTATGGAAAACACAAAATTCATAGAGAAAGCAAAGACATTGATGATACCAAACAAACAAGGTTACTCTCTCTTAAGGAAAATTAAGGCCAATTTGATGGAGTACATGAAGAAACCCTCAAAGACAATAGCAAGTGCCATTGTGTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTTGAAGAAATGAAACCAAAATCAAAGTGTGTCAAAAAGAAGTATTGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGAAAGAAAAAGATTGGTTTGTTGGTATCAAAAATGGAAAAGGTTTTGATGTGGTGTTGAAGAAGATAGGAATTTTTCTCACCATATCATTGGCTATTTGTACTATGTGGGCTAACCATATGATATAG 2031 0.3762 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSSGLQDAYALCRIFKKSTVIVPKVGEQYVNNVTMHANHMTSDQSSSIELYSEGRDEVLESSNYLMPWDTNSTQTLNGANTFSNNGGDITRDNNGIWTQFVSEDLLNLPTSSSSVPNYGSTPNYPPSKVDIALECARMQHRFTMPPLEVQDFPQVGISDHKTTHFASGSMCGTRNDTDILQEILSVAQASQELINQSNYSHTFGGNENYGTHHEHDNDFTFMVGNNNNYNHMSDNMMNSMRFDDKAWEDPNTRSIEIGSLDDEFKTERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEDISSFHTNRKENEVQVESEQQNMNKEINDTDIDNFSMEFINDNDNPNENFIDDGTIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHKLTPSQTIKVQLNPIMENTKFIEKAKTLMIPNKQGYSLLRKIKANLMEYMKKPSKTIASAIVFMFALFLVLCVYLKEQVEEMKPKSKCVKKKYCYGANSMKKIIWNEKEKDWFVGIKNGKGFDVVLKKIGIFLTISLAICTMWANHMI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00037 676 FunFam Nac domain-containing protein 86 15 160 - -
Vivi33g00037 676 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Vivi33g00037 676 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Vivi33g00037 676 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Vivi33g00037 676 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 309 - -
Vivi33g00037 676 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00037 1 602 NAC Transcription Factor Family AT1G65910 47.204 7.52e-164 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi33g00037 NAM 7.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00037 - - gsj:114381841 926.006