Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00030 ATGGTTCTCTCAAAAACAGCCTCCGAGTCCGATGTCTCCGTCCACTCTACCTTTGCTTCTCGCTATGTCAGAACTTCACTTCCCAGATTCAGGATGCCGGAGGAATCGATACCGAAGGATGCGGCATATCAGATCATAAACGATGAACTGATGCTGGATGGAAATCCTAGATTGAATCTGGCATCGTTTGTGACAACATGGATGGAGCCAGAGTGTGATAAACTCATCATGGCTTCCATCAACAAGAACTACGTTGACATGGATGAATACCCCGTCACCACTGAATTACAGAATCGATGTGTTAACATGATAGCTCATCTTTTCAATGCACCCCTTGAAGAAACTGAGACTGCAGTTGGTGTTGGAACCGTTGGTTCATCAGAGGCTATAATGTTAGCAGGATTAGCCTTCAAAAGAAAATGGCAGAACAAAAGAAAACTTGAGGGAAAGCCTATTGACAAACCCAACATTGTCACCGGAGCAAATGTCCAGGTTTGTTGGGAGAAATTCGCTAGGTACTTTGAGGTGGAGTTGAAAGAGGTGAAACTAAGTGAAGGATACTATGTAATGGACCCTAAAAAGGCTGTGGAGTTGGTTGATGAGAACACCATTTGTGTTGCTGCTATTCTTGGTTCAACGCTGAATGGCGAGTTTGAAGATGTTAAACTCTTAAACGATCTCCTTGTTGAAAAGAATAAGGAAACTGGATGGGACACTCCTATTCATGTGGATGCAGCTAGTGGTGGATTCATTGCTCCATTTATTTATCCAGAGCTTGAGTGGGATTTTCGTTTACCGCTAGTGAAGAGCATCAATGTTAGTGGTCACAAATATGGTCTTGTTTATGCTGGAATTGGTTGGGCTATTTGGAGAAGCAAGGATGATTTGCCTGAGGAACTTATCTTTCACATCAACTATCTTGGAGCTGATCAACCTACATTTACCCTCAACTTCTCTAAAGGTTCTAGCCAAGTTATTGCTCAATACTATCAAATGATTCGCCTTGGTTTTGAGGGGTATAAAGGTGTGATGGAAAATTGTAGAGACAACATGATAGTACTAAGAGAAGGACTCGAGAAAATGGGGCGCTTCAACATCGTGTCGAAAGACGACGGTGTTCCTCTCGTGGCCTTCACATTGAAGGACCACACACACTTCAACGAATTCCAAATCTCCGACTTGTTGAGGCGCTTTGGCTGGATTGTTCCGGCGTACAGCATGCCTCCAGACGCTCAACACATAACCGTTCTACGTGTTGTCATAAGGGAGGATTTCTCGAGGACTTTAGCAGAGCGCCTTGTGGCCGATATCGAGAAAGTGTTGCACGAGCTCGATGTACTTGCAGCGAGGATAAGGATGATAAGTAGCAGTAGCAATGTTACGGTTCTTGAAGAAGTTGTGAAGAGTAATGGTGAAGTTGTGACTGCGAAAAAGAGTGATTTGGAGACTCAAAGAGAGATAACTGCGGTTTGGAAGAAGTTTGTGTTGGAGAGGACGAAGTTGAATGATAAGATGAATGGTGTTTGCTAG 1530 0.4366 MVLSKTASESDVSVHSTFASRYVRTSLPRFRMPEESIPKDAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKLEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPKKAVELVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKDDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQMIRLGFEGYKGVMENCRDNMIVLREGLEKMGRFNIVSKDDGVPLVAFTLKDHTHFNEFQISDLLRRFGWIVPAYSMPPDAQHITVLRVVIREDFSRTLAERLVADIEKVLHELDVLAARIRMISSSSNVTVLEEVVKSNGEVVTAKKSDLETQREITAVWKKFVLERTKLNDKMNGVC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00030 509 FunFam Glutamate decarboxylase 1 65 - -
Vivi33g00030 509 FunFam Glutamate decarboxylase 66 360 - -
Vivi33g00030 509 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi33g00030 509 FunFam Glutamate decarboxylase 361 448 - -
Vivi33g00030 509 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi33g00030 509 Gene3D - 66 360 IPR015421 GO:0003824
Vivi33g00030 509 Gene3D - 1 65 - -
Vivi33g00030 509 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Vivi33g00030 509 Gene3D - 361 447 - -
Vivi33g00030 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi33g00030 1 509 Calmodulin-binding Proteins AT5G17330 83.757 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00030 K01580 - gmx:100796533 922.539