Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00020 ATGGATGCTCTGCTTTCTACCATCACCTCCACCACCAAACCCGATCTTTACATCAACGGTCCCAGAGGAACCCGAATTCCAGCTGATGCAGCCATTTTGGCTTCAGCGTCCCCAGTTCTAGATAACATGATAAAATCCAACAGAATCGTCGAAATCCGCGGCGTACCATACGACGCCGTCACAGCCTTTGTACGTTTCCTCTACACCTCCAGGTGCAGCGAGGAGGATATGGAAAATTACGGAATACACCTTCTTTCATTATCGCACGCGTATTCAGTGCCAAAGCTGAAGCAGAGTTGCGTTACTGGTTTGTCCAAACTTGCGACTATAGAAAATGTAGTGGACGTGTTGCATTTAGCAAGGCTCTGCGATGCACCGGATCTTTACCTCAACTGTGCGATGTTAATTAGAAAAAAATTCAGATCAGTGAAGAAAACAGAGGGATGGAAATTCTTGCACACAAATGATCCTCGGCTCGAAAAGGACATTGTCCAATTCATCAACGAGGACAAATCGAGGAAGTCGAGAATGAAGAGACAGAGGGAGGAACAGGAGGTGATTATGCAACTGAGTGAAGCAATGGAATGTTTGGAACATATATGTACGGAAGGATGTACCAGCGTGGCGCCGTACGATGTGGATGTTAAAGAACAGAGAAAGAGGATGCCTTGTTCGAAATTCTCCACGTGTCAAGGATTGCAGGTGCTGATTCGACATTTTGCCACGTGTGAGAAAAGGGTCAAGGGAGGGTGTATGAGGTGTAAGCGATTGTGGCAACTTTTTAGGCTTCATTCCTGTATTTGCATTCATCAAGATTCATGCAAGGTCCCTTTATGCAGGCAATTTCAATTGAAAATGGAGAAAGAGAACAAGGAAGATGATGCGAGCTGGAAATTACTAGTGAGGAAAGTGGGCTCAGCTAAAGCTATGTCTTCCTTACAGCAGCTACCAAAGAGATGA 960 0.4531 MDALLSTITSTTKPDLYINGPRGTRIPADAAILASASPVLDNMIKSNRIVEIRGVPYDAVTAFVRFLYTSRCSEEDMENYGIHLLSLSHAYSVPKLKQSCVTGLSKLATIENVVDVLHLARLCDAPDLYLNCAMLIRKKFRSVKKTEGWKFLHTNDPRLEKDIVQFINEDKSRKSRMKRQREEQEVIMQLSEAMECLEHICTEGCTSVAPYDVDVKEQRKRMPCSKFSTCQGLQVLIRHFATCEKRVKGGCMRCKRLWQLFRLHSCICIHQDSCKVPLCRQFQLKMEKENKEDDASWKLLVRKVGSAKAMSSLQQLPKR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00020 319 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 10 315 IPR044513 -
Vivi33g00020 319 SUPERFAMILY TAZ domain 182 283 IPR035898 -
Vivi33g00020 319 SMART TAZ_2 184 280 IPR000197 -
Vivi33g00020 319 Gene3D TAZ domain 181 309 IPR035898 -
Vivi33g00020 319 SMART BTB_4 12 108 IPR000210 GO:0005515
Vivi33g00020 319 Gene3D Potassium Channel Kv1.1; Chain A 1 104 IPR011333 -
Vivi33g00020 319 Pfam TAZ zinc finger 191 279 IPR000197 -
Vivi33g00020 319 Gene3D - 109 180 - -
Vivi33g00020 319 ProSiteProfiles BTB domain profile. 14 76 IPR000210 GO:0005515
Vivi33g00020 319 CDD BACK 109 152 - -
Vivi33g00020 319 FunFam BTB/POZ and TAZ domain-containing protein 2 180 308 - -
Vivi33g00020 319 Pfam BTB/POZ domain 18 104 IPR000210 GO:0005515
Vivi33g00020 319 FunFam BTB/POZ and TAZ domain-containing protein 2 109 179 - -
Vivi33g00020 319 SUPERFAMILY POZ domain 22 135 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi33g00020 zf-TAZ 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00020 - - gmx:100813611 433.335