Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi33g00019 ATGGATGCTCTGCTTTCTTCCATCACCACCTCCACCAAATCCGACCTTTACATCAACGGTCCCAGAGGAACACGAATTCCTGCTGGCGCAGCCATTCTGGCTTCAGCGTCCCCAATTCTAGAGAACATGGTAAAATCCAACAGAATAATCGAAATCCGCGGCGTACCATACGACGCCGTCACAGCCTTCATACGTTTCCTCTACACCTCCGGGAGCATCGAGGAGGATATGAAAAATTACGGAATACACCTTCTTGCATTATCGCACGCGTATTCAGTTCCAAAGCTGAAGCAGAGTTGCGTTACTAGTTTGTCTAAACTAGCGACTATAGAGAATGTGGTGGACGTGTTGCATCTAGCAAGACTCTGCGATGCACCGGATCTTTACCTCAACTGTGCAATGTTAATCAGAAAGAATTTCAGATCAGTGAAGAAAACAGAGGGATGGAAATTCTTGCACACTCATGATCCTTGTCTCGAAAAGGACATTGTCCAATTCATCAACGAGGACAAATCGAAGAAGAAGAGAATGATGAAACATAGGGAGGAACAGGAGGTGATTATGCAACTGAGCGAAGCAATGGAATGTTTGGAACATATATGTACGGAAGGTTGTACCAGCGTGGCACCGTACGATGTGGATGTTAAAGAACAGAGGAAGAGGATGCCTTGTTCGAAATTCTCCACGTGTCAAGGTTTGCAGGGGCTGATTCGACATTTTGCCACGTGTGAGAAGAGGGTCAAGGGAGGGTGTATGAGGTGTAAGAGATTGTGGCAACTTTTTAGGCTTCATTCATGTATTTGCATTCATCAAGATTCATGCAAGGTCCCTTTATGCAGGCAATTTCAATTGAAAATGGAGAAAGAGAACAAGGAAGATGATGCGAGCTGGAAATTACTAGTCAGGAAAGTGGGCTCAGCTAAAGCTATGTCTTCCTTACAGCAGCTACTAAAGAGATGA 960 0.449 MDALLSSITTSTKSDLYINGPRGTRIPAGAAILASASPILENMVKSNRIIEIRGVPYDAVTAFIRFLYTSGSIEEDMKNYGIHLLALSHAYSVPKLKQSCVTSLSKLATIENVVDVLHLARLCDAPDLYLNCAMLIRKNFRSVKKTEGWKFLHTHDPCLEKDIVQFINEDKSKKKRMMKHREEQEVIMQLSEAMECLEHICTEGCTSVAPYDVDVKEQRKRMPCSKFSTCQGLQGLIRHFATCEKRVKGGCMRCKRLWQLFRLHSCICIHQDSCKVPLCRQFQLKMEKENKEDDASWKLLVRKVGSAKAMSSLQQLLKR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi33g00019 319 FunFam BTB/POZ and TAZ domain-containing protein 2 109 179 - -
Vivi33g00019 319 SUPERFAMILY POZ domain 12 132 IPR011333 -
Vivi33g00019 319 ProSiteProfiles BTB domain profile. 14 70 IPR000210 GO:0005515
Vivi33g00019 319 SMART BTB_4 14 108 IPR000210 GO:0005515
Vivi33g00019 319 Gene3D TAZ domain 182 309 IPR035898 -
Vivi33g00019 319 SUPERFAMILY TAZ domain 182 283 IPR035898 -
Vivi33g00019 319 SMART TAZ_2 184 280 IPR000197 -
Vivi33g00019 319 Pfam TAZ zinc finger 191 279 IPR000197 -
Vivi33g00019 319 Gene3D Potassium Channel Kv1.1; Chain A 1 108 IPR011333 -
Vivi33g00019 319 CDD BACK 109 152 - -
Vivi33g00019 319 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 9 315 IPR044513 -
Vivi33g00019 319 Pfam BTB/POZ domain 14 105 IPR000210 GO:0005515
Vivi33g00019 319 Gene3D - 109 181 - -
Vivi33g00019 319 FunFam BTB/POZ and TAZ domain-containing protein 2 180 308 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi33g00019 BTB 1.1e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi33g00019 - - gmx:100813611 416.387